FFCP PHASE1:Hg19::chr7:81319697..81319713,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:81319697..81319713,+ | |||
|coexpression_cluster_id=C2903 | |||
|description=CAGE_peak_at_chr7:81319697..81319713,+ | |description=CAGE_peak_at_chr7:81319697..81319713,+ | ||
|id=chr7:81319697..81319713,+ | |id=chr7:81319697..81319713,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.46e-17!9;CL:0000055!3.01e-11!180;CL:0000594!5.10e-11!3;CL:0002564!1.35e-10!3;CL:0002504!2.71e-10!3;CL:1000279!2.71e-10!3;CL:1000280!2.71e-10!3;CL:0000680!6.73e-08!57;CL:0000056!6.73e-08!57;CL:0000355!6.73e-08!57;CL:0002602!9.59e-08!2;CL:0000187!2.72e-07!54;CL:0000785!4.15e-07!2;CL:0000955!4.15e-07!2;CL:0000818!4.15e-07!2;CL:0000954!4.15e-07!2;CL:0000816!4.15e-07!2 | |ontology_enrichment_celltype=CL:0000188!1.46e-17!9;CL:0000055!3.01e-11!180;CL:0000594!5.10e-11!3;CL:0002564!1.35e-10!3;CL:0002504!2.71e-10!3;CL:1000279!2.71e-10!3;CL:1000280!2.71e-10!3;CL:0000680!6.73e-08!57;CL:0000056!6.73e-08!57;CL:0000355!6.73e-08!57;CL:0002602!9.59e-08!2;CL:0000187!2.72e-07!54;CL:0000785!4.15e-07!2;CL:0000955!4.15e-07!2;CL:0000818!4.15e-07!2;CL:0000954!4.15e-07!2;CL:0000816!4.15e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000188;7.84e-28;9!CL:0000594;1.86e-21;3!CL:0002553;2.25e-16;1!CL:0000680;9.31e-10;7!CL:0000187;7.21e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,8.11e-28,9;CL:0000594,1.96e-21,3;CL:0002553,1.93e-16,1;CL:0000187,5.23e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!1.35e-10!3;UBERON:0003068!1.35e-10!3;UBERON:0002328!1.35e-10!3;UBERON:0004880!1.35e-10!3;UBERON:0000914!2.00e-10!83;UBERON:0002329!2.00e-10!83;UBERON:0003077!2.00e-10!83;UBERON:0003059!2.00e-10!83;UBERON:0007282!2.00e-10!83;UBERON:0009618!2.00e-10!83;UBERON:0007285!2.00e-10!83;UBERON:0009568!9.59e-08!2;UBERON:0002216!9.59e-08!2;UBERON:0002209!9.59e-08!2;UBERON:0002213!9.59e-08!2;UBERON:0004267!9.59e-08!2;UBERON:0006444!9.59e-08!2;UBERON:0001995!9.59e-08!2;UBERON:0004715!9.59e-08!2;UBERON:0001468!9.59e-08!2;UBERON:0001130!9.59e-08!2;UBERON:0001066!9.59e-08!2;UBERON:0001134!3.54e-07!61;UBERON:0002036!3.54e-07!61;UBERON:0003082!3.54e-07!61;UBERON:0002385!7.49e-07!63;UBERON:0001015!7.49e-07!63;UBERON:0000383!7.49e-07!63;UBERON:0004290!8.56e-07!70 | |ontology_enrichment_uberon=UBERON:0002242!1.35e-10!3;UBERON:0003068!1.35e-10!3;UBERON:0002328!1.35e-10!3;UBERON:0004880!1.35e-10!3;UBERON:0000914!2.00e-10!83;UBERON:0002329!2.00e-10!83;UBERON:0003077!2.00e-10!83;UBERON:0003059!2.00e-10!83;UBERON:0007282!2.00e-10!83;UBERON:0009618!2.00e-10!83;UBERON:0007285!2.00e-10!83;UBERON:0009568!9.59e-08!2;UBERON:0002216!9.59e-08!2;UBERON:0002209!9.59e-08!2;UBERON:0002213!9.59e-08!2;UBERON:0004267!9.59e-08!2;UBERON:0006444!9.59e-08!2;UBERON:0001995!9.59e-08!2;UBERON:0004715!9.59e-08!2;UBERON:0001468!9.59e-08!2;UBERON:0001130!9.59e-08!2;UBERON:0001066!9.59e-08!2;UBERON:0001134!3.54e-07!61;UBERON:0002036!3.54e-07!61;UBERON:0003082!3.54e-07!61;UBERON:0002385!7.49e-07!63;UBERON:0001015!7.49e-07!63;UBERON:0000383!7.49e-07!63;UBERON:0004290!8.56e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.83e-16;16!UBERON:0002036;7.83e-16;16!UBERON:0002385;5.15e-12;31!UBERON:0001015;5.15e-12;31!UBERON:0000383;5.15e-12;31 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17847724779836,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0.336672227908132,1.50142223846357,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,2.50085260529839,0.542530047399471,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,5.08360436478326,6.60065801322357,0.413509717453592,2.25582514223375,0.725083469571143,3.06815858697963,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,1.37268514868027,0.589062011728432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,4.04530825862126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32883516901568,0,0,1.77962244319307,0,0.302461847526478,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0.801711364730253,0,0.6828739083758,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17847724779836,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0.336672227908132,1.50142223846357,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,2.50085260529839,0.542530047399471,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,5.08360436478326,6.60065801322357,0.413509717453592,2.25582514223375,0.725083469571143,3.06815858697963,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,1.37268514868027,0.589062011728432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,4.04530825862126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32883516901568,0,0,1.77962244319307,0,0.302461847526478,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0.801711364730253,0,0.6828739083758,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr7:81319697..81319713,+ | |short_description=p@chr7:81319697..81319713,+ | ||
}} | }} |
Latest revision as of 12:03, 31 July 2015
Short description: | p@chr7:81319697..81319713, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:81319697..81319713, + |
Coexpression cluster: | C2903_Skeletal_mesenchymal_glioma_Nucleus_large_sacrococcigeal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 8.11e-28 | 9 |
skeletal muscle satellite cell | 1.96e-21 | 3 |
lung fibroblast | 1.93e-16 | 1 |
muscle cell | 5.23e-07 | 55 |