FFCP PHASE1:Hg19::chr7:94057156..94057168,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:94057156..94057168,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr7:94057156..94057168,+ | |description=CAGE_peak_at_chr7:94057156..94057168,+ | ||
|id=chr7:94057156..94057168,+ | |id=chr7:94057156..94057168,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.94e-40!180;CL:0000057!6.57e-27!75;CL:0000680!6.05e-16!57;CL:0000056!6.05e-16!57;CL:0000355!6.05e-16!57;CL:0000187!9.25e-16!54;CL:0000183!2.55e-15!59;CL:0000048!3.89e-14!430;CL:0000723!2.89e-13!436;CL:0000192!3.20e-13!42;CL:0000514!3.20e-13!42;CL:0000393!9.57e-13!60;CL:0000211!9.57e-13!60;CL:0000034!1.82e-12!444;CL:0002620!7.00e-11!23;CL:0000359!7.21e-11!32;CL:0002334!9.91e-09!12;CL:0002371!9.86e-08!591;CL:0000499!1.06e-07!27;CL:0000327!3.63e-07!14;CL:0002320!8.54e-07!365;CL:0002494!9.27e-07!16 | |ontology_enrichment_celltype=CL:0000055!9.94e-40!180;CL:0000057!6.57e-27!75;CL:0000680!6.05e-16!57;CL:0000056!6.05e-16!57;CL:0000355!6.05e-16!57;CL:0000187!9.25e-16!54;CL:0000183!2.55e-15!59;CL:0000048!3.89e-14!430;CL:0000723!2.89e-13!436;CL:0000192!3.20e-13!42;CL:0000514!3.20e-13!42;CL:0000393!9.57e-13!60;CL:0000211!9.57e-13!60;CL:0000034!1.82e-12!444;CL:0002620!7.00e-11!23;CL:0000359!7.21e-11!32;CL:0002334!9.91e-09!12;CL:0002371!9.86e-08!591;CL:0000499!1.06e-07!27;CL:0000327!3.63e-07!14;CL:0002320!8.54e-07!365;CL:0002494!9.27e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000499;2.41e-10;28!CL:0002620;3.11e-10;23!CL:0000057;1.35e-09;73!CL:0002334;1.41e-08;12!CL:0000327;1.50e-08;15!CL:0000153;1.16e-07;9!CL:0000447;1.16e-07;9!CL:0002320;2.26e-07;188!CL:0000138;5.63e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.14e-23,76;CL:0000048,2.59e-14,427;CL:0000723,1.00e-13,433;CL:0000034,5.72e-13,441;CL:0002320,8.25e-11,361;CL:0000499,1.81e-10,28;CL:0002620,3.85e-10,23;CL:0000134,5.15e-10,354;CL:0000327,8.12e-09,15;CL:0002334,1.06e-08,12;CL:0000153,6.41e-08,9;CL:0000447,6.41e-08,9;CL:0000219,9.71e-08,386;CL:0000136,3.24e-07,15;CL:0000058,4.90e-07,6;CL:0000138,4.90e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.98e-08;5!DOID:450;3.98e-08;5!DOID:66;3.98e-08;5!DOID:423;3.98e-08;5!DOID:0080000;3.98e-08;5!DOID:11722;3.98e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.56e-08,5;DOID:450,4.56e-08,5;DOID:66,4.56e-08,5;DOID:423,4.56e-08,5;DOID:0080000,4.56e-08,5;DOID:11722,4.56e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.11e-19!83;UBERON:0002329!4.11e-19!83;UBERON:0003077!4.11e-19!83;UBERON:0003059!4.11e-19!83;UBERON:0007282!4.11e-19!83;UBERON:0009618!4.11e-19!83;UBERON:0007285!4.11e-19!83;UBERON:0004290!3.06e-17!70;UBERON:0001134!3.02e-16!61;UBERON:0002036!3.02e-16!61;UBERON:0003082!3.02e-16!61;UBERON:0002385!6.91e-16!63;UBERON:0001015!6.91e-16!63;UBERON:0000383!6.91e-16!63;UBERON:0000486!6.68e-14!82;UBERON:0005256!3.73e-11!143;UBERON:0004872!2.91e-10!84;UBERON:0003102!3.33e-09!95;UBERON:0002199!7.77e-09!45;UBERON:0002416!7.77e-09!45;UBERON:0002100!4.18e-08!216;UBERON:0000475!4.58e-08!365;UBERON:0004535!5.37e-08!110;UBERON:0001009!8.59e-08!113;UBERON:0000948!1.03e-07!24;UBERON:0005498!1.03e-07!24;UBERON:0004140!1.03e-07!24;UBERON:0009881!1.03e-07!24;UBERON:0004141!1.03e-07!24;UBERON:0003084!1.03e-07!24;UBERON:0007005!1.03e-07!24;UBERON:0004139!1.03e-07!24;UBERON:0004291!1.03e-07!24;UBERON:0002384!1.41e-07!375;UBERON:0002049!1.54e-07!79;UBERON:0007798!1.54e-07!79;UBERON:0002097!1.56e-07!40;UBERON:0001637!2.43e-07!42;UBERON:0003509!2.43e-07!42;UBERON:0004572!2.43e-07!42;UBERON:0007100!5.98e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!4.11e-19!83;UBERON:0002329!4.11e-19!83;UBERON:0003077!4.11e-19!83;UBERON:0003059!4.11e-19!83;UBERON:0007282!4.11e-19!83;UBERON:0009618!4.11e-19!83;UBERON:0007285!4.11e-19!83;UBERON:0004290!3.06e-17!70;UBERON:0001134!3.02e-16!61;UBERON:0002036!3.02e-16!61;UBERON:0003082!3.02e-16!61;UBERON:0002385!6.91e-16!63;UBERON:0001015!6.91e-16!63;UBERON:0000383!6.91e-16!63;UBERON:0000486!6.68e-14!82;UBERON:0005256!3.73e-11!143;UBERON:0004872!2.91e-10!84;UBERON:0003102!3.33e-09!95;UBERON:0002199!7.77e-09!45;UBERON:0002416!7.77e-09!45;UBERON:0002100!4.18e-08!216;UBERON:0000475!4.58e-08!365;UBERON:0004535!5.37e-08!110;UBERON:0001009!8.59e-08!113;UBERON:0000948!1.03e-07!24;UBERON:0005498!1.03e-07!24;UBERON:0004140!1.03e-07!24;UBERON:0009881!1.03e-07!24;UBERON:0004141!1.03e-07!24;UBERON:0003084!1.03e-07!24;UBERON:0007005!1.03e-07!24;UBERON:0004139!1.03e-07!24;UBERON:0004291!1.03e-07!24;UBERON:0002384!1.41e-07!375;UBERON:0002049!1.54e-07!79;UBERON:0007798!1.54e-07!79;UBERON:0002097!1.56e-07!40;UBERON:0001637!2.43e-07!42;UBERON:0003509!2.43e-07!42;UBERON:0004572!2.43e-07!42;UBERON:0007100!5.98e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.01e-09;9!UBERON:0000042;1.01e-09;9!UBERON:0003688;2.10e-09;6!UBERON:0002358;2.10e-09;6!UBERON:0003684;2.10e-09;6!UBERON:0001178;2.10e-09;6!UBERON:0002199;1.32e-07;46!UBERON:0002416;1.32e-07;46!UBERON:0002384;1.34e-07;198!UBERON:0002097;1.79e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.16e-11,371;UBERON:0002199,1.83e-10,46;UBERON:0002416,1.83e-10,46;UBERON:0003688,1.79e-09,6;UBERON:0002358,1.79e-09,6;UBERON:0003684,1.79e-09,6;UBERON:0001178,1.79e-09,6;UBERON:0002097,4.17e-09,41;UBERON:0003102,2.49e-07,99;UBERON:0004457,4.44e-07,12;UBERON:0000042,4.44e-07,12 | |||
|phase1_expression=2.18014055124668,4.92431204949261,2.96004248601539,5.00366491765652,3.5756887554183,2.61701557230111,2.53299878168311,0,0.522371256399677,0,0,0,0.263766978228454,0.247532705920093,0.331397375727916,2.6893005858071,1.80808358407193,2.19093027116212,1.95173119516203,0.369363174230364,0.816002764977012,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0.767175371061182,3.2529523714611,2.50668955317945,2.89693037921647,3.1811437882044,7.29952305453954,0.283604451492204,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,1.64619665163954,0.529636723252875,5.73673241497627,1.41867352879343,1.12135520028461,2.1349799145941,1.2333377420858,0,0.67355336034844,0.653847612453835,2.8757911252537,4.03323147135999,0,0,0,0.448346041655403,0.587172493218824,0.323745888736263,0.280901613404497,0,0.491337269247072,0.516628905878827,2.37600571456411,4.20353779773547,0.910161361938026,0,0.841680569770331,0.500474079487857,0.554128230968366,0.877955241761676,4.59731693698529,1.20190447125277,0.907457465280168,3.7671823494661,2.56268866582281,2.11931901159562,3.00091096084402,2.57631323096097,2.83404594050192,2.79175284497385,2.02531598689519,2.53336213419116,3.5340728394176,1.10459878370759,3.23292113637624,6.39017266529906,2.21654616100809,0.847802961552438,0,0,0,0,0,0.116193942869518,0,0,0,4.69348596989448,3.21620469096443,0,0.928735856063958,5.0531563716871,0,0,0,0,0,0,0,0,0,0,1.40241773803446,3.7041661019826,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0,0,0,1.03993478527958,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.560655421726804,0.43596006883328,0.22001485746285,1.03417372606222,0,0.845302752556,1.06375246633948,0,0.257207374262142,0,0.799266537048298,1.85871391755592,2.17048642156577,0,0,0.710783897485092,0,0,0,0,0,0,0,0.958499421966331,2.29723871668228,0,1.01346914667305,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.00034104211935,0,6.65506756898583,17.1291829245275,6.78120384645919,2.10854546986884,1.80567659836631,0,1.03473071292505,0.664225598535437,0.737476674166813,0.60818530127658,2.15381273209015,2.05886054286514,0,0,0,0,3.32870879020994,0.30239029332968,2.72918588600655,2.91577749247319,4.77122160536225,2.81906128362542,1.02341449813341,4.02134802859019,2.96836132889982,1.3878872442239,1.06537035187876,0.0821271560138091,0.519254429183621,0.813472649219715,0,0,0,1.49258782613989,2.00300284807389,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0,0.616194468458578,0.307007349452259,0.413509717453592,0.429680979473094,0.435050081742686,0.0852266274161009,0.801288320820636,0,0,0,0,0,10.7036197922418,0.6970372701606,2.46426864140871,1.06461206063404,0,0.18532421910392,0.286249773483982,0.372158369359667,0.949138274156178,0.953150969619124,0.511795582622668,1.71175595213568,1.27281299170375,0,0.539617372749944,1.92175920815238,0.353437207037059,0.808729926293264,0,0.421258456238981,1.95053495635836,0.731140468893853,0,0.9554993798559,1.55545975149084,2.26016233240486,2.2054613741845,3.3171948762061,1.31535265576129,0,1.31178950409327,0.811641507850816,0.30982349809975,0.281695602532241,0.717056761020258,0.88424136911809,1.426684205925,0,1.68886108238131,1.97576935775941,0.75894634753143,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,2.17727711363265,0,0,0,0.295930216910801,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.638002319463839,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,1.22206028986725,0,0,0,0,5.61804353109152,0,0,0,0,0,2.41981432097328,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0.687944129886466,0,0,0,0.0969890164884194,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,0,0,0,0.859530882839914,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0,0.201550417460179,6.48539790376326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0.25426853765475,0.542999601753713,1.72844298240254,1.30634944043764,0,0,1.19271615249795,0,0,0,0,0,0,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,2.10341978862502,2.21922344601045,2.84104507912634,1.25783950876288,2.66943366478961,0.457680136793847,1.81477108515887,1.08806040407946,1.03498604992744,0.63718706865481,2.24901556081802,0.310525913752519,2.07353103920428,1.86089200190596,1.5652351854352,1.20206087197775,2.28483127301277,0,0.909243296012797,0.214821114084977,0.928067519756987,2.78667122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| ||
|short_description=p@chr7:94057156..94057168,+ | |short_description=p@chr7:94057156..94057168,+ | ||
}} | }} |
Latest revision as of 12:46, 31 July 2015
Short description: | p@chr7:94057156..94057168, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94057156..94057168, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.14e-23 | 76 |
multi fate stem cell | 2.59e-14 | 427 |
somatic stem cell | 1.00e-13 | 433 |
stem cell | 5.72e-13 | 441 |
connective tissue cell | 8.25e-11 | 361 |
stromal cell | 1.81e-10 | 28 |
skin fibroblast | 3.85e-10 | 23 |
mesenchymal cell | 5.15e-10 | 354 |
extracellular matrix secreting cell | 8.12e-09 | 15 |
preadipocyte | 1.06e-08 | 12 |
GAG secreting cell | 6.41e-08 | 9 |
carbohydrate secreting cell | 6.41e-08 | 9 |
motile cell | 9.71e-08 | 386 |
fat cell | 3.24e-07 | 15 |
chondroblast | 4.90e-07 | 6 |
chondrocyte | 4.90e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.16e-11 | 371 |
integument | 1.83e-10 | 46 |
integumental system | 1.83e-10 | 46 |
omentum | 1.79e-09 | 6 |
peritoneum | 1.79e-09 | 6 |
abdominal cavity | 1.79e-09 | 6 |
visceral peritoneum | 1.79e-09 | 6 |
skin of body | 4.17e-09 | 41 |
surface structure | 2.49e-07 | 99 |
cavity lining | 4.44e-07 | 12 |
serous membrane | 4.44e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.56e-08 | 5 |
myotonic disease | 4.56e-08 | 5 |
muscle tissue disease | 4.56e-08 | 5 |
myopathy | 4.56e-08 | 5 |
muscular disease | 4.56e-08 | 5 |
myotonic dystrophy | 4.56e-08 | 5 |