FFCP PHASE1:Hg19::chr16:71842952..71843016,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:71842952..71843016,-
|short_description=p2@AP1G1
|description=CAGE_peak_2_at_AP1G1_5end
|association_with_transcript=0bp_to_ENST00000299980,ENST0000042542...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=164 | |EntrezGene=164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=555 | |HGNC=555 | ||
|TSSclassifier=strong | |||
|UniProt=O43747,E7EUH1,B3KXW5,Q8IY97 | |UniProt=O43747,E7EUH1,B3KXW5,Q8IY97 | ||
|association_with_transcript=0bp_to_ENST00000299980,ENST00000425422,ENST00000433195,NM_001030007,NM_001128,uc002fba.2,uc002fbb.2,uc010cgg.2,uc010vmg.1,uc010vmh.1_5end | |||
|cluster_id=chr16:71842952..71843016,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_AP1G1_5end | |||
|id=chr16:71842952..71843016,- | |||
|ontology_enrichment_celltype=CL:0000766!4.59e-15!76;CL:0000860!5.64e-15!45;CL:0000738!1.20e-14!140;CL:0002057!3.96e-14!42;CL:0002194!1.25e-13!63;CL:0000576!1.25e-13!63;CL:0000040!1.25e-13!63;CL:0000559!1.25e-13!63;CL:0002009!1.45e-13!65;CL:0002087!2.04e-13!119;CL:0002031!1.12e-11!124;CL:0000557!1.94e-11!71;CL:0000839!4.25e-11!70;CL:0000003!2.19e-07!722;CL:0000063!8.93e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.42e-16;33!CL:0002057;4.42e-16;33!CL:0000473;2.87e-12;39!CL:0000234;2.87e-12;39!CL:0000576;1.26e-09;48!CL:0000766;8.67e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.86e-15,72;CL:0000738,2.99e-14,136;CL:0000860,3.96e-14,42;CL:0002057,3.96e-14,42;CL:0002194,2.24e-13,59;CL:0000576,2.24e-13,59;CL:0000040,2.24e-13,59;CL:0000559,2.24e-13,59;CL:0002009,2.66e-13,61;CL:0000473,4.40e-13,48;CL:0000234,4.40e-13,48;CL:0002087,4.86e-13,115;CL:0002031,2.65e-11,120;CL:0000557,4.00e-11,67;CL:0000839,8.79e-11,66 | |||
|ontology_enrichment_development_v019=CL:0002057;6.38e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.94e-09!80;UBERON:0001474!8.34e-09!86;UBERON:0002390!1.21e-08!102;UBERON:0003061!1.21e-08!102;UBERON:0002405!3.35e-08!115;UBERON:0002193!4.29e-08!112;UBERON:0004765!5.46e-08!101;UBERON:0001434!5.46e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-09,76;UBERON:0001474,1.85e-08,82;UBERON:0002390,2.71e-08,98;UBERON:0003061,2.71e-08,98;UBERON:0002405,5.68e-08,93;UBERON:0002193,9.53e-08,108;UBERON:0004765,1.07e-07,90;UBERON:0001434,9.16e-07,100 | |||
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|short_description=p2@AP1G1 | |||
}} | }} |
Latest revision as of 18:21, 17 September 2015
Short description: | p2@AP1G1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AP1G1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000299980, ENST00000425422, ENST00000433195, NM_001030007, NM_001128, uc002fba.2, uc002fbb.2, uc010cgg.2, uc010vmg.1, uc010vmh.1_5end |
EntrezGene: | AP1G1 |
HGNC: | 555 |
UniProt: | O43747E7EUH1B3KXW5Q8IY97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.86e-15 | 72 |
leukocyte | 2.99e-14 | 136 |
classical monocyte | 3.96e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.96e-14 | 42 |
monopoietic cell | 2.24e-13 | 59 |
monocyte | 2.24e-13 | 59 |
monoblast | 2.24e-13 | 59 |
promonocyte | 2.24e-13 | 59 |
macrophage dendritic cell progenitor | 2.66e-13 | 61 |
defensive cell | 4.40e-13 | 48 |
phagocyte | 4.40e-13 | 48 |
nongranular leukocyte | 4.86e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 2.65e-11 | 120 |
granulocyte monocyte progenitor cell | 4.00e-11 | 67 |
myeloid lineage restricted progenitor cell | 8.79e-11 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-09 | 76 |
bone element | 1.85e-08 | 82 |
hematopoietic system | 2.71e-08 | 98 |
blood island | 2.71e-08 | 98 |
immune system | 5.68e-08 | 93 |
hemolymphoid system | 9.53e-08 | 108 |
skeletal element | 1.07e-07 | 90 |
skeletal system | 9.16e-07 | 100 |