FFCP PHASE1:Hg19::chr8:144940065..144940069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:144940065..144940069,- | |||
|coexpression_cluster_id=C4733 | |||
|description=CAGE_peak_at_chr8:144940065..144940069,- | |description=CAGE_peak_at_chr8:144940065..144940069,- | ||
|id=chr8:144940065..144940069,- | |id=chr8:144940065..144940069,- | ||
|ontology_enrichment_celltype=CL:0000066!7.93e-25!254;CL:0002076!3.56e-13!43;CL:0000223!3.37e-12!59;CL:0002251!5.39e-08!21 | |ontology_enrichment_celltype=CL:0000066!7.93e-25!254;CL:0002076!3.56e-13!43;CL:0000223!3.37e-12!59;CL:0002251!5.39e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.87e-17;42!CL:0002251;1.20e-13;20!CL:0002368;4.54e-08;13!CL:0000244;6.72e-07;4!CL:0000731;6.72e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.65e-29,253;CL:0002076,4.03e-20,42;CL:0000223,1.49e-18,58;CL:0002251,2.91e-13,20;CL:0002368,4.24e-08,13;CL:0000244,5.98e-07,4;CL:0000731,5.98e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;2.78e-10;58!UBERON:0008947;5.58e-07;29 | |||
|ontology_enrichment_disease=DOID:305!8.24e-23!106;DOID:0050687!3.44e-17!143 | |ontology_enrichment_disease=DOID:305!8.24e-23!106;DOID:0050687!3.44e-17!143 | ||
|ontology_enrichment_disease_v019=DOID:305;5.22e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.33e-20,106;DOID:0050687,2.23e-14,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.63e-19!169;UBERON:0000925!5.63e-19!169;UBERON:0006595!5.63e-19!169;UBERON:0001007!2.76e-14!155;UBERON:0001555!2.76e-14!155;UBERON:0007026!2.76e-14!155;UBERON:0004921!4.39e-13!129;UBERON:0004185!4.39e-13!129;UBERON:0001004!5.91e-11!72;UBERON:0000077!1.82e-10!130;UBERON:0001041!7.28e-09!98;UBERON:0000065!5.53e-08!53;UBERON:0001737!7.55e-07!9 | |ontology_enrichment_uberon=UBERON:0004119!5.63e-19!169;UBERON:0000925!5.63e-19!169;UBERON:0006595!5.63e-19!169;UBERON:0001007!2.76e-14!155;UBERON:0001555!2.76e-14!155;UBERON:0007026!2.76e-14!155;UBERON:0004921!4.39e-13!129;UBERON:0004185!4.39e-13!129;UBERON:0001004!5.91e-11!72;UBERON:0000077!1.82e-10!130;UBERON:0001041!7.28e-09!98;UBERON:0000065!5.53e-08!53;UBERON:0001737!7.55e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.90e-10;9!UBERON:0001557;4.90e-10;9!UBERON:0004921;1.23e-09;33!UBERON:0000065;3.56e-09;44!UBERON:0001004;9.02e-08;65!UBERON:0005631;1.58e-07;10!UBERON:0000158;1.58e-07;10!UBERON:0001555;3.47e-07;54!UBERON:0005409;3.76e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.04e-21,160;UBERON:0000925,6.04e-21,160;UBERON:0006595,6.04e-21,160;UBERON:0001007,3.78e-15,145;UBERON:0001555,3.78e-15,145;UBERON:0007026,3.78e-15,145;UBERON:0004921,1.46e-14,118;UBERON:0001004,2.69e-13,74;UBERON:0001041,3.76e-11,87;UBERON:0001737,3.63e-10,9;UBERON:0000065,9.73e-10,54;UBERON:0008947,5.19e-08,38;UBERON:0003258,5.19e-08,38;UBERON:0005631,1.30e-07,14;UBERON:0000158,1.30e-07,14;UBERON:0000166,6.85e-07,22;UBERON:0005409,8.63e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,4.91467873003018,16.0494268633658,1.31064823278103,1.58260186937072,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0120591877825,2.9580320813343,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,1.43921049299656,0,0.977766799900771,0.946895611469467,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0.289803085735052,1.4828656316206,0.535081656179426,0,0,0.383220493601921,0.68725489096526,0,0.95569624297229,0.651083453856419,0,0.301150238155546,0.511946444617674,2.49861453104692,0.710331756132051,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.24430121722827,8.01449634243593,19.2807910247903,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.624232346414,0,0.12663051166458,0,0,0,1.12135520028461,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,3.67195621010264,3.27295344709002,2.29443676311203,1.34171076742555,1.32529768321485,1.74290914304278,1.7622379352613,2.01856680700503,2.91981887260664,0,0,0,0,0,3.43089720115547,1.85443159085912,4.09718750801919,4.19117096383097,1.08939722046203,3.32178866755535,1.8876383142423,2.15843611637881,1.53898862778556,0,1.40241773803446,0,0,0,0.982827216677626,0,0,2.82873408649161,0,6.91426798074341,1.1240175325762,2.71428225511403,2.96283024507295,0,0,0,0,0,0,0,0,8.69224837755203,3.43394464837949,0,0,0,2.81201501960331,0.503946384596579,0.141775097242386,0.626909658919938,0,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,2.9115920614313,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,3.33440328590885,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,5.61418116849198,5.61694032508968,0,0,0,2.70719767744447,1.30926073077505,0.784349769176855,0,0.633309773357254,0,0,0,0,2.98041081298238,3.01013864312912,0.509752546090077,0.831076008928724,1.34324852833307,0,0,0,0.328014645699706,0.650756789328606,0.309123034943167,0,0,9.18824860793876,9.75090369054782,0,0,0,0,0,0,0,0,0.267096106940212,9.91709492165869,7.68760269460425,29.9889874362273,5.0578890427775,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,4.52243929809907,0,0,0.564862804660675,10.3321289441095,10.1082885400575,17.2937759879304,3.90529780351831,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,1.71528151186722,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0.111443384277478,0,39.8703289511942,5.64232893582013,36.2449628477094,0,0,0.111308705022906,0,2.95575571379191,1.19548792950642,0.552567831062295,1.25966373927138,0,0,0.622079175323615,0.539210106883961,10.2042069565097,0,0.591860433821602,0,0,0,0.0927680981618513,0,2.3438498497671,1.04951999995435,0.724999575434793,4.89311827627649,8.89887776024682,5.43691668066254,1.03423011972439,1.16641845353302,0.173624994933292,0,0.241192877250816,0,0.442317039724898,0,0.219385397153973,0.871507708151921,24.6780027373128,0.230850775511391,0,1.61394733071642,2.60297168788339,0.869178975376065,9.57003479195758,1.28236630762607,1.06606955203727,0,0,0,0.451191321234361,0.392125068635479,0.167821586975843,0,0,0,0.163232808159148,2.26164914294305,0,10.9478812418636,1.76915129006678,4.27721101453538,0,0,0,0,0,0.468528891450678,0,1.56531695145672,0,2.76209081994573,7.25944296291983,0.30607276163049,0.063186579628488,0.300646838828985,1.55532287095871,0.664653872707185,0,0,0,0.853828638089378,0.138674673013139,0.694238953340524,6.27151343452017,0,0.873633341210151,0,1.06431964417994,1.0232504392066,0.985385484638511,2.03676934625681,0.0882561266915003,1.35588444468319,0,0,0,4.88878456837007,0.160317640503067,0.426905989478705,40.5613507451724,1.00863292007874,0.114536596165916,0,0.864328787928898,0,7.30651507312066,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,1.99679000498991,0,0.223171457441873,0,0,0,1.6544468284517,1.2362378757175,1.95470277177136,0.492137407573744,0,0,0,3.05430982083536,2.88832816854191,3.73896304226267,0.2249738915515,11.6070293183692,0,16.1008650047648,0.709251365692784,0.577000469484979,0.105600336519406,0,0.767660789277781,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,1.32506888912221,0.258565912723101,0.26446520348538,0,0,1.06787412567695,0,1.24271716604159,0.992332043623902,0,0,2.55336503108073,0,0,0,0,0.942324577501406,0,0,0.1251909307065,0,0.332787154610557,0.372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|short_description=p@chr8:144940065..144940069,- | |short_description=p@chr8:144940065..144940069,- | ||
}} | }} |
Latest revision as of 15:59, 31 July 2015
Short description: | p@chr8:144940065..144940069, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:144940065..144940069, - |
Coexpression cluster: | C4733_amniotic_Alveolar_gastric_immature_Esophageal_Corneal_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.65e-29 | 253 |
endo-epithelial cell | 4.03e-20 | 42 |
endodermal cell | 1.49e-18 | 58 |
epithelial cell of alimentary canal | 2.91e-13 | 20 |
respiratory epithelial cell | 4.24e-08 | 13 |
transitional epithelial cell | 5.98e-07 | 4 |
urothelial cell | 5.98e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.04e-21 | 160 |
endoderm | 6.04e-21 | 160 |
presumptive endoderm | 6.04e-21 | 160 |
digestive system | 3.78e-15 | 145 |
digestive tract | 3.78e-15 | 145 |
primitive gut | 3.78e-15 | 145 |
subdivision of digestive tract | 1.46e-14 | 118 |
respiratory system | 2.69e-13 | 74 |
foregut | 3.76e-11 | 87 |
larynx | 3.63e-10 | 9 |
respiratory tract | 9.73e-10 | 54 |
respiratory primordium | 5.19e-08 | 38 |
endoderm of foregut | 5.19e-08 | 38 |
extraembryonic membrane | 1.30e-07 | 14 |
membranous layer | 1.30e-07 | 14 |
oral opening | 6.85e-07 | 22 |
gastrointestinal system | 8.63e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.33e-20 | 106 |
cell type cancer | 2.23e-14 | 143 |