FFCP PHASE1:Hg19::chr10:24755416..24755470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56243 | |EntrezGene=56243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25428 | |HGNC=25428 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHU3,Q5T5P2 | |UniProt=E9PHU3,Q5T5P2 | ||
|association_with_transcript=0bp_to_ENST00000376451,ENST00000396445,ENST00000396446,ENST00000450158,uc001irx.2,uc001iry.2,uc001irz.2_5end | |association_with_transcript=0bp_to_ENST00000376451,ENST00000396445,ENST00000396446,ENST00000450158,uc001irx.2,uc001iry.2,uc001irz.2_5end | ||
|cluster_id=chr10:24755416..24755470,+ | |||
|description=CAGE_peak_1_at_KIAA1217_5end | |description=CAGE_peak_1_at_KIAA1217_5end | ||
|id=chr10:24755416..24755470,+ | |id=chr10:24755416..24755470,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.13e-22!254;CL:0000223!2.54e-12!59;CL:0002076!3.64e-10!43;CL:0002251!4.49e-07!21;CL:0000220!5.27e-07!246 | |ontology_enrichment_celltype=CL:0000066!3.13e-22!254;CL:0000223!2.54e-12!59;CL:0002076!3.64e-10!43;CL:0002251!4.49e-07!21;CL:0000220!5.27e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.19e-09;42!CL:0002251;1.82e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.72e-22,253;CL:0000223,5.13e-13,58;CL:0002076,1.09e-10,42;CL:0002251,1.56e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;4.62e-07;58 | |||
|ontology_enrichment_disease=DOID:305!6.09e-13!106;DOID:0050687!1.31e-09!143;DOID:299!4.38e-07!25;DOID:120!4.40e-07!27;DOID:193!4.47e-07!29 | |ontology_enrichment_disease=DOID:305!6.09e-13!106;DOID:0050687!1.31e-09!143;DOID:299!4.38e-07!25;DOID:120!4.40e-07!27;DOID:193!4.47e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:299;1.59e-07;25!DOID:120;2.69e-07;27!DOID:193;5.42e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.04e-13,106;DOID:0050687,7.77e-10,143;DOID:299,1.54e-07,25;DOID:120,1.99e-07,27;DOID:193,3.98e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.58e-21!169;UBERON:0000925!7.58e-21!169;UBERON:0006595!7.58e-21!169;UBERON:0001007!8.35e-18!155;UBERON:0001555!8.35e-18!155;UBERON:0007026!8.35e-18!155;UBERON:0000481!1.42e-13!347;UBERON:0003104!2.21e-13!238;UBERON:0009142!2.21e-13!238;UBERON:0000077!2.39e-12!130;UBERON:0004921!1.02e-11!129;UBERON:0004185!1.02e-11!129;UBERON:0000466!3.09e-11!126;UBERON:0000475!6.42e-11!365;UBERON:0002100!2.43e-10!216;UBERON:0005177!7.92e-10!107;UBERON:0005911!1.50e-09!82;UBERON:0000468!8.51e-09!659;UBERON:0001041!8.31e-08!98;UBERON:0003100!1.30e-07!41;UBERON:0003102!1.55e-07!95;UBERON:0000062!1.63e-07!511;UBERON:0005156!1.81e-07!59;UBERON:0000990!1.81e-07!59;UBERON:0005256!1.89e-07!143;UBERON:0000464!2.15e-07!104;UBERON:0001048!2.52e-07!168;UBERON:0003929!3.14e-07!54;UBERON:0003134!3.64e-07!37;UBERON:0000474!3.64e-07!37;UBERON:0003133!4.68e-07!48;UBERON:0009569!6.03e-07!113;UBERON:0001004!7.21e-07!72;UBERON:0000480!8.45e-07!626;UBERON:0009497!9.62e-07!25;UBERON:0000015!9.62e-07!25;UBERON:0002423!9.62e-07!25;UBERON:0006235!9.62e-07!25;UBERON:0004161!9.62e-07!25 | |ontology_enrichment_uberon=UBERON:0004119!7.58e-21!169;UBERON:0000925!7.58e-21!169;UBERON:0006595!7.58e-21!169;UBERON:0001007!8.35e-18!155;UBERON:0001555!8.35e-18!155;UBERON:0007026!8.35e-18!155;UBERON:0000481!1.42e-13!347;UBERON:0003104!2.21e-13!238;UBERON:0009142!2.21e-13!238;UBERON:0000077!2.39e-12!130;UBERON:0004921!1.02e-11!129;UBERON:0004185!1.02e-11!129;UBERON:0000466!3.09e-11!126;UBERON:0000475!6.42e-11!365;UBERON:0002100!2.43e-10!216;UBERON:0005177!7.92e-10!107;UBERON:0005911!1.50e-09!82;UBERON:0000468!8.51e-09!659;UBERON:0001041!8.31e-08!98;UBERON:0003100!1.30e-07!41;UBERON:0003102!1.55e-07!95;UBERON:0000062!1.63e-07!511;UBERON:0005156!1.81e-07!59;UBERON:0000990!1.81e-07!59;UBERON:0005256!1.89e-07!143;UBERON:0000464!2.15e-07!104;UBERON:0001048!2.52e-07!168;UBERON:0003929!3.14e-07!54;UBERON:0003134!3.64e-07!37;UBERON:0000474!3.64e-07!37;UBERON:0003133!4.68e-07!48;UBERON:0009569!6.03e-07!113;UBERON:0001004!7.21e-07!72;UBERON:0000480!8.45e-07!626;UBERON:0009497!9.62e-07!25;UBERON:0000015!9.62e-07!25;UBERON:0002423!9.62e-07!25;UBERON:0006235!9.62e-07!25;UBERON:0004161!9.62e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.28e-07;25!UBERON:0000165;6.62e-07;28!UBERON:0001555;6.84e-07;54 | |||
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|phase1_expression=3.27021082687002,2.99740733447376,0.422863212287913,0,0,0.872338524100369,7.59899634504932,6.94891860769514,0,5.40614660303319,2.09340350391728,11.7958340950293,17.4086205630779,8.78741106016331,8.61633176892581,7.39557661096953,12.0538905604795,7.30310090387373,8.29485757943862,10.9577741688341,7.95602695852587,24.7629229967689,1.14494394852423,6.70684682857133,2.63639543149086,0.152826811495903,0.164201178899891,0.393553906568396,0,0,0.464448369948228,6.43594857135249,6.024118375565,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.557052284425868,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0,0,0,0.339928028092699,0.766440987203842,0.34362744548263,0,0,0,0.950452044448374,0.301150238155546,0,0,0.236777252044017,0,0.80642697289893,0,0,0,0,0.383587685530591,16.2647618573055,21.0561922467074,25.492987337105,1.5905718941022,3.40644409211845,10.6824343395397,8.64744650103999,5.44575671297381,19.8433299379035,6.19301990097322,5.19098219898201,0.324547393654683,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0,0,0.275118041940067,0.208994966536811,6.71883573840255,16.3652480835887,8.70273593188143,1.61131726843659,2.28081631715554,0.24406205754817,0,1.62028389576352,2.41109266367015,3.14341121676638,1.57656072676651,0,0,0,0,0,12.6467275121335,16.8970463576408,2.78587125662075,12.1816446348161,1.72101972449288,1.77334191099179,1.68203280042692,1.06748995729705,6.90669135568048,2.17847724779836,1.21239604862719,0.817309515567294,2.72443369760877,4.03323147135999,0.70296429550139,2.49728061464256,1.71141546463335,1.19558944441441,2.11382097558777,3.88495066483516,3.37081936085396,4.69554593886255,4.79053837515895,4.23635702820638,43.956105719436,33.8755693111623,2.73048408581408,2.15585442544872,4.20840284885166,7.75734823206178,6.64953877162039,46.5316278133688,16.5503409731471,40.4140378458745,0.340296549480063,20.0916391971525,12.813443329114,10.3846631568185,7.20218630602566,6.18315175430633,9.79034052173391,4.65292140828975,10.126579934476,3.41029518064195,10.3497847440087,5.06274442532646,0.484938170456436,11.3603069605317,4.63459651847145,6.78242369241951,17.9732593441866,29.4565810238101,27.5332411573444,0.121973706129595,0,0.232387885739037,0.829288440122964,1.26160425437814,0,10.9514672630871,9.00537313470039,0,9.28735856063958,5.0531563716871,5.08719240171329,5.05754070234305,4.57920956778616,4.41175890929576,3.7039505495709,3.79632990577755,4.71909578560575,7.06397274451246,13.4661504931237,1.4763109092493,2.80483547606892,6.173610169971,5.88034845542168,32.956309053676,16.7080626835196,35.4473944008842,0,30.2551558816059,15.9558063577629,28.2058233500168,0,8.54496265498862,11.018024973865,0.325808305310325,2.07986957055916,8.6598805215164,1.73895607462615,14.7934954737135,1.15493158208859,0.462985512576611,0.570762456703795,7.11183958163348,7.72637545885385,0,0,0,19.6841051372232,28.2209975374084,28.2132443512349,6.89600624811932,6.97521452433509,2.30029607499127,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,5.27016096423195,1.74384027533312,2.71351657537515,31.6715703606556,0,2.535908257668,0,0,5.40135485950498,8.5109479213967,8.52550972851518,7.86378965119812,30.9294315073123,10.70212437815,1.95441710576241,6.04166312862328,3.95975936466715,24.1151501647669,13.0730018790044,25.4931127514245,0,0,0,14.6171161849865,11.4861935834114,14.2636905040718,2.17171960001369,2.26023954805422,3.58121926479791,0,0.591092280605782,0,0.128343036279748,2.28685161800217,2.60279707715243,0.773288812777695,0.335032530668698,0,0,0,0,10.551468287846,10.0034104211935,16.8184314693836,23.2927364914504,29.797641129126,17.3472656537328,29.8710608231419,40.0258312637866,27.2889004867182,5.17365356462525,25.2405727443466,14.1964259777111,3.12781012085098,1.56640925970192,2.40200396667599,0.206768026122887,0,0.106727557803444,12.4282304292966,6.65741758041988,19.0505884797699,3.47350930946288,6.1384789315225,5.05188169979532,0.256278298511402,1.53512174720011,0.804269605718038,0,5.39733928309294,4.97172830876756,12.5654548701128,8.82732529612156,9.18061989833678,17.4037607411936,18.8476082085088,4.51196845785892,3.09999010044438,0.910455840033585,5.24497659837697,9.92639148396306,14.9409753982565,14.9026456143602,16.0753147118587,15.6216410761456,1.13733384070897,2.38131187387122,3.88648648983851,1.54227252690289,19.2371970656136,15.5523829895005,12.4889373792069,9.97291210714469,13.8802347927751,0,0,0.512900250232778,5.9042636225947,1.62689197332152,21.2264483994308,20.2368517248539,21.1224319796705,43.6441808877091,16.251506150913,6.42735719376638,5.60690166094307,2.61882649094895,2.14905144616581,1.37836572484531,3.75970857038958,1.59518363305651,2.98293195956353,6.76643470915204,13.7186479749612,19.4111968038757,34.072594236054,13.251669292077,0.929691098594572,4.40737285562896,2.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| ||
|short_description=p1@KIAA1217 | |short_description=p1@KIAA1217 | ||
}} | }} |
Latest revision as of 16:38, 17 September 2015
Short description: | p1@KIAA1217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA1217_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376451, ENST00000396445, ENST00000396446, ENST00000450158, uc001irx.2, uc001iry.2, uc001irz.2_5end |
EntrezGene: | KIAA1217 |
HGNC: | 25428 |
UniProt: | E9PHU3Q5T5P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.72e-22 | 253 |
endodermal cell | 5.13e-13 | 58 |
endo-epithelial cell | 1.09e-10 | 42 |
epithelial cell of alimentary canal | 1.56e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.94e-20 | 160 |
endoderm | 4.94e-20 | 160 |
presumptive endoderm | 4.94e-20 | 160 |
digestive system | 5.71e-17 | 145 |
digestive tract | 5.71e-17 | 145 |
primitive gut | 5.71e-17 | 145 |
subdivision of digestive tract | 7.97e-11 | 118 |
trunk region element | 1.39e-10 | 101 |
endo-epithelium | 1.06e-09 | 82 |
trunk | 1.24e-08 | 199 |
surface structure | 2.69e-08 | 99 |
female organism | 4.74e-08 | 41 |
mesenchyme | 5.86e-08 | 160 |
entire embryonic mesenchyme | 5.86e-08 | 160 |
female reproductive organ | 1.38e-07 | 37 |
female reproductive system | 1.38e-07 | 37 |
reproductive structure | 2.15e-07 | 59 |
reproductive system | 2.15e-07 | 59 |
subdivision of trunk | 2.25e-07 | 112 |
reproductive organ | 3.64e-07 | 48 |
gut epithelium | 4.62e-07 | 54 |
respiratory system | 4.80e-07 | 74 |
epithelium of foregut-midgut junction | 5.67e-07 | 25 |
anatomical boundary | 5.67e-07 | 25 |
hepatobiliary system | 5.67e-07 | 25 |
foregut-midgut junction | 5.67e-07 | 25 |
septum transversum | 5.67e-07 | 25 |
foregut | 6.28e-07 | 87 |
abdomen element | 8.83e-07 | 54 |
abdominal segment element | 8.83e-07 | 54 |
mouth | 9.35e-07 | 29 |
stomodeum | 9.35e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.04e-13 | 106 |
cell type cancer | 7.77e-10 | 143 |
adenocarcinoma | 1.54e-07 | 25 |
female reproductive organ cancer | 1.99e-07 | 27 |
reproductive organ cancer | 3.98e-07 | 29 |