FFCP PHASE1:Hg19::chr8:21914187..21914198,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2039 | |EntrezGene=2039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |HGNC=3382 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFK4 | |UniProt=E5RFK4 | ||
|association_with_transcript=-217bp_to_ENST00000520174_5end | |association_with_transcript=-217bp_to_ENST00000520174_5end | ||
|cluster_id=chr8:21914187..21914198,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_15_at_EPB49_5end | |description=CAGE_peak_15_at_EPB49_5end | ||
|id=chr8:21914187..21914198,+ | |id=chr8:21914187..21914198,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.95e-16;2!CL:0000558;2.95e-16;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.95e-16,2;CL:0000765,2.95e-16,2;CL:0000050,2.95e-16,2;CL:0000038,2.95e-16,2;CL:0000558,2.95e-16,2;CL:0000547,2.95e-16,2;CL:0000549,2.95e-16,2;CL:0000550,2.95e-16,2;CL:0000552,2.95e-16,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!6.07e-08!8;DOID:8692!1.79e-07!31 | |ontology_enrichment_disease=DOID:1036!6.07e-08!8;DOID:8692!1.79e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;7.67e-09;8!DOID:8692;7.12e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.27e-09,8;DOID:8692,4.69e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.95e-51!115;UBERON:0001049!2.38e-37!57;UBERON:0005068!2.38e-37!57;UBERON:0006241!2.38e-37!57;UBERON:0007135!2.38e-37!57;UBERON:0001017!1.62e-31!82;UBERON:0002616!2.64e-31!59;UBERON:0005743!2.79e-31!86;UBERON:0002780!4.15e-31!41;UBERON:0001890!4.15e-31!41;UBERON:0006240!4.15e-31!41;UBERON:0000955!6.04e-31!69;UBERON:0006238!6.04e-31!69;UBERON:0003080!3.31e-30!42;UBERON:0001893!4.48e-30!34;UBERON:0002020!5.27e-30!34;UBERON:0003528!5.27e-30!34;UBERON:0002619!1.18e-29!22;UBERON:0001869!1.32e-29!32;UBERON:0001950!1.92e-29!20;UBERON:0000073!6.43e-29!94;UBERON:0001016!6.43e-29!94;UBERON:0002791!3.86e-28!33;UBERON:0003075!2.91e-26!86;UBERON:0007284!2.91e-26!86;UBERON:0000956!1.24e-25!25;UBERON:0000203!1.24e-25!25;UBERON:0002346!1.19e-24!90;UBERON:0003056!3.09e-20!61;UBERON:0000153!2.12e-17!129;UBERON:0007811!2.12e-17!129;UBERON:0000033!1.65e-16!123;UBERON:0000200!1.42e-14!6;UBERON:0001871!2.23e-14!7;UBERON:0004121!4.41e-14!169;UBERON:0000924!1.65e-13!173;UBERON:0006601!1.65e-13!173;UBERON:0000178!2.52e-13!15;UBERON:0000179!2.52e-13!15;UBERON:0000463!2.52e-13!15;UBERON:0003076!2.39e-08!15;UBERON:0003057!2.39e-08!15;UBERON:0002771!4.66e-08!3;UBERON:0001872!6.84e-08!5;UBERON:0000349!7.49e-08!5;UBERON:0000988!9.95e-08!3;UBERON:0000025!2.90e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!9.95e-51!115;UBERON:0001049!2.38e-37!57;UBERON:0005068!2.38e-37!57;UBERON:0006241!2.38e-37!57;UBERON:0007135!2.38e-37!57;UBERON:0001017!1.62e-31!82;UBERON:0002616!2.64e-31!59;UBERON:0005743!2.79e-31!86;UBERON:0002780!4.15e-31!41;UBERON:0001890!4.15e-31!41;UBERON:0006240!4.15e-31!41;UBERON:0000955!6.04e-31!69;UBERON:0006238!6.04e-31!69;UBERON:0003080!3.31e-30!42;UBERON:0001893!4.48e-30!34;UBERON:0002020!5.27e-30!34;UBERON:0003528!5.27e-30!34;UBERON:0002619!1.18e-29!22;UBERON:0001869!1.32e-29!32;UBERON:0001950!1.92e-29!20;UBERON:0000073!6.43e-29!94;UBERON:0001016!6.43e-29!94;UBERON:0002791!3.86e-28!33;UBERON:0003075!2.91e-26!86;UBERON:0007284!2.91e-26!86;UBERON:0000956!1.24e-25!25;UBERON:0000203!1.24e-25!25;UBERON:0002346!1.19e-24!90;UBERON:0003056!3.09e-20!61;UBERON:0000153!2.12e-17!129;UBERON:0007811!2.12e-17!129;UBERON:0000033!1.65e-16!123;UBERON:0000200!1.42e-14!6;UBERON:0001871!2.23e-14!7;UBERON:0004121!4.41e-14!169;UBERON:0000924!1.65e-13!173;UBERON:0006601!1.65e-13!173;UBERON:0000178!2.52e-13!15;UBERON:0000179!2.52e-13!15;UBERON:0000463!2.52e-13!15;UBERON:0003076!2.39e-08!15;UBERON:0003057!2.39e-08!15;UBERON:0002771!4.66e-08!3;UBERON:0001872!6.84e-08!5;UBERON:0000349!7.49e-08!5;UBERON:0000988!9.95e-08!3;UBERON:0000025!2.90e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.47e-40;15!UBERON:0000179;3.47e-40;15!UBERON:0000463;3.47e-40;15!UBERON:0002390;8.89e-21;32!UBERON:0001870;1.45e-10;3!UBERON:0002193;1.94e-10;42!UBERON:0002902;1.53e-08;1!UBERON:0001882;1.53e-08;1!UBERON:0009899;1.53e-08;1!UBERON:0007190;1.53e-08;1!UBERON:0005403;1.53e-08;1!UBERON:0001893;6.51e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.48e-40,15;UBERON:0000179,3.48e-40,15;UBERON:0000463,3.48e-40,15;UBERON:0007023,6.50e-18,114;UBERON:0001870,2.15e-10,3;UBERON:0002902,1.32e-08,1;UBERON:0009899,1.32e-08,1;UBERON:0007190,1.53e-08,1;UBERON:0001882,1.65e-08,1;UBERON:0005403,1.65e-08,1;UBERON:0001869,2.29e-07,32;UBERON:0001893,6.44e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0,0,0,0,0.763976851116555,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.085954325713,7.84306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7010854492686,19.8805673857018,22.2162402997923,6.4322579373603,9.87269455406866,14.9148861574325,26.4615404246676,19.0350042310625,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,1.23087398947712,4.32729085561573,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,9.57932369387759,0,1.93866549219044,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,1.35357396370308,2.35275041181287,0,0.948768663620925,0.953619473882272,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01297273529406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.789744236554321,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,3.85834847521893,0,0,0,1.32506888912221,0.775697738169303,0.13223260174269,0,0,0.320362237703084,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.251909307065,0,0,0.496771223531068,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,0,0.478901577171454,0.615349092722265,0,1.38314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.35075169236789,0.781078098613847,0.413373593002368,0.887821342714695,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,1.42736439251347,0.855046056317038,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,3.41626806259959,0,0,0,0,0,0,0,0,1.76777874496378,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0,0,0,0,0.763976851116555,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.085954325713,7.84306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7010854492686,19.8805673857018,22.2162402997923,6.4322579373603,9.87269455406866,14.9148861574325,26.4615404246676,19.0350042310625,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,1.23087398947712,4.32729085561573,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,9.57932369387759,0,1.93866549219044,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,1.35357396370308,2.35275041181287,0,0.948768663620925,0.953619473882272,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01297273529406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.789744236554321,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,3.85834847521893,0,0,0,1.32506888912221,0.775697738169303,0.13223260174269,0,0,0.320362237703084,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,1.251909307065,0,0,0.496771223531068,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,0,0.478901577171454,0.615349092722265,0,1.38314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.35075169236789,0.781078098613847,0.413373593002368,0.887821342714695,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,1.42736439251347,0.855046056317038,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,3.41626806259959,0,0,0,0,0,0,0,0,1.76777874496378,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@EPB49 | |short_description=p15@EPB49 | ||
}} | }} |
Latest revision as of 09:41, 17 September 2015
Short description: | p15@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_EPB49_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -217bp_to_ENST00000520174_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | E5RFK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.95e-16 | 2 |
erythroblast | 2.95e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 2.95e-16 | 2 |
erythroid progenitor cell | 2.95e-16 | 2 |
reticulocyte | 2.95e-16 | 2 |
proerythroblast | 2.95e-16 | 2 |
basophilic erythroblast | 2.95e-16 | 2 |
polychromatophilic erythroblast | 2.95e-16 | 2 |
orthochromatic erythroblast | 2.95e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.48e-40 | 15 |
haemolymphatic fluid | 3.48e-40 | 15 |
organism substance | 3.48e-40 | 15 |
adult organism | 6.50e-18 | 114 |
frontal cortex | 2.15e-10 | 3 |
occipital pole | 1.32e-08 | 1 |
pole of cerebral hemisphere | 1.32e-08 | 1 |
paracentral gyrus | 1.53e-08 | 1 |
nucleus accumbens | 1.65e-08 | 1 |
ventral striatum | 1.65e-08 | 1 |
cerebral hemisphere | 2.29e-07 | 32 |
telencephalon | 6.44e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.27e-09 | 8 |
myeloid leukemia | 4.69e-08 | 31 |