FFCP PHASE1:Hg19::chr10:6821545..6821563,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100507127 | |EntrezGene=100507127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000436383,NR_038291_5end | |association_with_transcript=0bp_to_ENST00000436383,NR_038291_5end | ||
|cluster_id=chr10:6821545..6821563,+ | |||
|description=CAGE_peak_2_at_LOC100507127_5end | |description=CAGE_peak_2_at_LOC100507127_5end | ||
|id=chr10:6821545..6821563,+ | |id=chr10:6821545..6821563,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.74e-14!254;CL:0002159!3.98e-08!13;CL:0002605!2.49e-07!3;CL:0000221!3.00e-07!71 | |ontology_enrichment_celltype=CL:0000066!4.74e-14!254;CL:0002159!3.98e-08!13;CL:0002605!2.49e-07!3;CL:0000221!3.00e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.19e-23;3!CL:0002327;2.17e-17;4!CL:0000128;2.50e-17;7!CL:0000126;2.50e-17;7!CL:0000127;2.50e-17;7!CL:0000240;8.19e-12;6!CL:0000311;8.19e-12;6!CL:0000079;8.19e-12;6!CL:0000237;8.19e-12;6!CL:0002252;5.07e-09;1!CL:0002336;1.17e-08;1!CL:0002261;1.17e-08;1!CL:0000228;1.17e-08;1!CL:0002170;1.17e-08;1!CL:0002372;1.17e-08;1!CL:0000362;4.89e-08;9!CL:0000243;3.19e-07;15!CL:0000125;3.19e-07;15!CL:0000312;5.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.12e-23,3;CL:0000128,1.58e-17,7;CL:0000126,1.58e-17,7;CL:0000127,1.58e-17,7;CL:0002453,1.58e-17,7;CL:0002327,1.64e-17,4;CL:0000240,8.21e-12,6;CL:0000311,8.21e-12,6;CL:0000079,8.21e-12,6;CL:0000237,8.21e-12,6;CL:0000036,8.21e-12,6;CL:0000357,8.21e-12,6;CL:0000114,8.21e-12,6;CL:0002252,5.28e-09,1;CL:0002336,7.18e-09,1;CL:0002261,7.18e-09,1;CL:0002170,7.18e-09,1;CL:0000228,1.32e-08,1;CL:0002372,1.32e-08,1;CL:0000362,5.14e-08,9;CL:0000243,2.66e-07,15;CL:0000125,2.66e-07,15;CL:0000030,2.66e-07,15;CL:0000339,2.66e-07,15;CL:0000066,4.71e-07,253;CL:0000312,6.85e-07,5;CL:0000221,7.68e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;8.19e-12;6!CL:0000114;8.19e-12;6!CL:0000339;3.19e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;5.07e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.70e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.12e-09!9;UBERON:0005085!4.73e-08!29 | |ontology_enrichment_uberon=UBERON:0001737!4.12e-09!9;UBERON:0005085!4.73e-08!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.17e-17;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.64e-17,4;UBERON:0005333,1.64e-17,4;UBERON:0008425,1.64e-17,4;UBERON:0005311,1.64e-17,4;UBERON:0000076,5.10e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0.123766352960047,0,0,0,0,0,0,0,0,1.71741592278634,2.6006140763848,2.51085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.747243402759005,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.505008341862199,0.125118519871964,0.831192346452549,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0,0.220587945464788,0.217879444092406,0.949082476444386,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,4.32274581370013,1.75918045801206,0.325808305310325,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,1.97028749946266,3.19697332365358,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.895304816199478,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86740153530765,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,1.02580050046556,0.328014645699706,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.673554789078584,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,1.73856760253663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.992975867626496,0.313932918407225,0,0,0.138674673013139,0,0.587954384486266,1.13176968554523,0,0,0.580537987734511,0.438535902517113,1.14961639874493,0,0,0,1.50746117111426,0,0,0,0.0801588202515337,0,0,0,0,0,1.58460277786965,1.61528296235062,3.06402245001834,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0.530067437837643,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0.845248493434508,0,0,0,0,0,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0.40341013740704,0,0,2.12903492763126,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,8.62815038452968,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0.123766352960047,0,0,0,0,0,0,0,0,1.71741592278634,2.6006140763848,2.51085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.747243402759005,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.505008341862199,0.125118519871964,0.831192346452549,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0,0.220587945464788,0.217879444092406,0.949082476444386,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,4.32274581370013,1.75918045801206,0.325808305310325,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,1.97028749946266,3.19697332365358,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0.895304816199478,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86740153530765,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,1.02580050046556,0.328014645699706,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.673554789078584,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,1.73856760253663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.992975867626496,0.313932918407225,0,0,0.138674673013139,0,0.587954384486266,1.13176968554523,0,0,0.580537987734511,0.438535902517113,1.14961639874493,0,0,0,1.50746117111426,0,0,0,0.0801588202515337,0,0,0,0,0,1.58460277786965,1.61528296235062,3.06402245001834,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0.530067437837643,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0.845248493434508,0,0,0,0,0,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0.40341013740704,0,0,2.12903492763126,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,8.62815038452968,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LOC100507127 | |short_description=p2@LOC100507127 | ||
}} | }} |
Latest revision as of 21:47, 18 September 2015
Short description: | p2@LOC100507127 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100507127_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000436383, NR_038291_5end |
EntrezGene: | LOC100507127 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.12e-23 | 3 |
oligodendrocyte | 1.58e-17 | 7 |
macroglial cell | 1.58e-17 | 7 |
astrocyte | 1.58e-17 | 7 |
oligodendrocyte precursor cell | 1.58e-17 | 7 |
mammary gland epithelial cell | 1.64e-17 | 4 |
stratified squamous epithelial cell | 8.21e-12 | 6 |
keratin accumulating cell | 8.21e-12 | 6 |
stratified epithelial cell | 8.21e-12 | 6 |
keratinizing barrier epithelial cell | 8.21e-12 | 6 |
epithelial fate stem cell | 8.21e-12 | 6 |
stratified epithelial stem cell | 8.21e-12 | 6 |
surface ectodermal cell | 8.21e-12 | 6 |
epithelial cell of esophagus | 5.28e-09 | 1 |
buccal mucosa cell | 7.18e-09 | 1 |
endothelial cell of viscerocranial mucosa | 7.18e-09 | 1 |
keratinized cell of the oral mucosa | 7.18e-09 | 1 |
multinucleate cell | 1.32e-08 | 1 |
myotube | 1.32e-08 | 1 |
epidermal cell | 5.14e-08 | 9 |
glial cell (sensu Vertebrata) | 2.66e-07 | 15 |
glial cell | 2.66e-07 | 15 |
glioblast | 2.66e-07 | 15 |
glioblast (sensu Vertebrata) | 2.66e-07 | 15 |
epithelial cell | 4.71e-07 | 253 |
keratinocyte | 6.85e-07 | 5 |
ectodermal cell | 7.68e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.64e-17 | 4 |
mammary bud | 1.64e-17 | 4 |
mammary ridge | 1.64e-17 | 4 |
mammary placode | 1.64e-17 | 4 |
external ectoderm | 5.10e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.70e-09 | 1 |