FFCP PHASE1:Hg19::chr11:68808366..68808381,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:68808366..68808381,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:68808366..68808381,- | |description=CAGE_peak_at_chr11:68808366..68808381,- | ||
|id=chr11:68808366..68808381,- | |id=chr11:68808366..68808381,- | ||
|ontology_enrichment_celltype=CL:0002057!8.23e-17!42;CL:0000055!1.36e-16!180;CL:0000860!4.01e-15!45;CL:0000133!2.85e-12!59;CL:0000128!5.96e-11!7;CL:0000126!5.96e-11!7;CL:0000127!5.96e-11!7;CL:0002453!5.96e-11!7;CL:0000333!4.62e-10!41;CL:0000144!5.16e-10!625;CL:0000710!7.38e-10!20;CL:0000221!1.11e-09!71;CL:0002371!1.69e-09!591;CL:0000148!2.29e-09!10;CL:0000541!2.29e-09!10;CL:0002194!2.59e-08!63;CL:0000576!2.59e-08!63;CL:0000040!2.59e-08!63;CL:0000559!2.59e-08!63;CL:0002009!7.61e-08!65;CL:0000075!1.23e-07!27;CL:0000147!1.42e-07!14;CL:0000548!1.51e-07!679;CL:0000004!1.51e-07!679;CL:0000255!1.51e-07!679;CL:0000219!2.04e-07!390;CL:0000012!2.36e-07!682;CL:0000839!8.32e-07!70 | |ontology_enrichment_celltype=CL:0002057!8.23e-17!42;CL:0000055!1.36e-16!180;CL:0000860!4.01e-15!45;CL:0000133!2.85e-12!59;CL:0000128!5.96e-11!7;CL:0000126!5.96e-11!7;CL:0000127!5.96e-11!7;CL:0002453!5.96e-11!7;CL:0000333!4.62e-10!41;CL:0000144!5.16e-10!625;CL:0000710!7.38e-10!20;CL:0000221!1.11e-09!71;CL:0002371!1.69e-09!591;CL:0000148!2.29e-09!10;CL:0000541!2.29e-09!10;CL:0002194!2.59e-08!63;CL:0000576!2.59e-08!63;CL:0000040!2.59e-08!63;CL:0000559!2.59e-08!63;CL:0002009!7.61e-08!65;CL:0000075!1.23e-07!27;CL:0000147!1.42e-07!14;CL:0000548!1.51e-07!679;CL:0000004!1.51e-07!679;CL:0000255!1.51e-07!679;CL:0000219!2.04e-07!390;CL:0000012!2.36e-07!682;CL:0000839!8.32e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-23;33!CL:0002057;1.43e-23;33!CL:0000128;6.10e-17;7!CL:0000126;6.10e-17;7!CL:0000127;6.10e-17;7!CL:0000473;8.32e-17;39!CL:0000234;8.32e-17;39!CL:0002603;3.84e-15;3!CL:0000576;1.31e-09;48!CL:0000766;9.23e-08;69!CL:0002564;3.82e-07;3!CL:0000243;8.51e-07;15!CL:0000125;8.51e-07;15!CL:0002567;8.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.62e-19,42;CL:0002057,2.62e-19,42;CL:0000128,5.45e-17,7;CL:0000126,5.45e-17,7;CL:0000127,5.45e-17,7;CL:0002453,5.45e-17,7;CL:0000473,1.70e-16,48;CL:0000234,1.70e-16,48;CL:0002603,3.59e-15,3;CL:0002194,1.43e-12,59;CL:0000576,1.43e-12,59;CL:0000040,1.43e-12,59;CL:0000559,1.43e-12,59;CL:0002009,4.59e-12,61;CL:0000839,6.20e-11,66;CL:0000557,9.95e-11,67;CL:0000766,8.73e-10,72;CL:0000333,9.91e-09,41;CL:0002564,3.33e-07,3;CL:0000133,6.46e-07,59;CL:0000243,8.15e-07,15;CL:0000125,8.15e-07,15;CL:0000030,8.15e-07,15;CL:0000339,8.15e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-13;42!CL:0000339;8.51e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.22e-14!167;UBERON:0004765!1.32e-10!101;UBERON:0001434!1.32e-10!101;UBERON:0001474!2.79e-08!86;UBERON:0002371!3.37e-07!80 | |ontology_enrichment_uberon=UBERON:0002204!3.22e-14!167;UBERON:0004765!1.32e-10!101;UBERON:0001434!1.32e-10!101;UBERON:0001474!2.79e-08!86;UBERON:0002371!3.37e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;8.53e-09;5!UBERON:0002216;8.53e-09;5!UBERON:0011134;8.53e-09;5!UBERON:0002209;8.53e-09;5!UBERON:0002213;8.53e-09;5!UBERON:0007844;8.53e-09;5!UBERON:0011138;8.53e-09;5!UBERON:0001130;8.53e-09;5!UBERON:0001066;8.53e-09;5!UBERON:0001468;8.53e-09;5!UBERON:0002037;8.69e-08;6!UBERON:0002242;3.82e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,3.53e-16,90;UBERON:0001434,9.56e-16,100;UBERON:0002204,8.62e-13,167;UBERON:0001474,1.04e-12,82;UBERON:0002371,3.20e-12,76;UBERON:0002405,2.29e-09,93;UBERON:0011135,7.26e-09,5;UBERON:0002216,7.26e-09,5;UBERON:0011134,7.26e-09,5;UBERON:0002209,7.26e-09,5;UBERON:0002213,7.26e-09,5;UBERON:0005856,7.26e-09,5;UBERON:0005866,7.26e-09,5;UBERON:0005863,7.26e-09,5;UBERON:0007844,7.26e-09,5;UBERON:0011138,7.26e-09,5;UBERON:0001130,7.26e-09,5;UBERON:0001066,7.26e-09,5;UBERON:0001468,7.26e-09,5;UBERON:0002390,1.02e-08,98;UBERON:0003061,1.02e-08,98;UBERON:0002037,8.41e-08,6;UBERON:0006215,8.41e-08,6;UBERON:0002193,1.33e-07,108;UBERON:0002242,3.33e-07,3;UBERON:0003068,3.33e-07,3;UBERON:0002328,3.33e-07,3;UBERON:0004880,3.33e-07,3 | |||
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| ||
|short_description=p@chr11:68808366..68808381,- | |short_description=p@chr11:68808366..68808381,- | ||
}} | }} |
Latest revision as of 01:55, 24 July 2015
Short description: | p@chr11:68808366..68808381, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:68808366..68808381, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.62e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.62e-19 | 42 |
oligodendrocyte | 5.45e-17 | 7 |
macroglial cell | 5.45e-17 | 7 |
astrocyte | 5.45e-17 | 7 |
oligodendrocyte precursor cell | 5.45e-17 | 7 |
defensive cell | 1.70e-16 | 48 |
phagocyte | 1.70e-16 | 48 |
astrocyte of the cerebellum | 3.59e-15 | 3 |
monopoietic cell | 1.43e-12 | 59 |
monocyte | 1.43e-12 | 59 |
monoblast | 1.43e-12 | 59 |
promonocyte | 1.43e-12 | 59 |
macrophage dendritic cell progenitor | 4.59e-12 | 61 |
myeloid lineage restricted progenitor cell | 6.20e-11 | 66 |
granulocyte monocyte progenitor cell | 9.95e-11 | 67 |
myeloid leukocyte | 8.73e-10 | 72 |
migratory neural crest cell | 9.91e-09 | 41 |
nucleus pulposus cell of intervertebral disc | 3.33e-07 | 3 |
neurectodermal cell | 6.46e-07 | 59 |
glial cell (sensu Vertebrata) | 8.15e-07 | 15 |
glial cell | 8.15e-07 | 15 |
glioblast | 8.15e-07 | 15 |
glioblast (sensu Vertebrata) | 8.15e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 3.53e-16 | 90 |
skeletal system | 9.56e-16 | 100 |
musculoskeletal system | 8.62e-13 | 167 |
bone element | 1.04e-12 | 82 |
bone marrow | 3.20e-12 | 76 |
immune system | 2.29e-09 | 93 |
intervertebral cartilage | 7.26e-09 | 5 |
symphysis | 7.26e-09 | 5 |
nonsynovial joint | 7.26e-09 | 5 |
fibrous joint | 7.26e-09 | 5 |
cartilaginous joint | 7.26e-09 | 5 |
developing mesenchymal condensation | 7.26e-09 | 5 |
pre-cartilage condensation | 7.26e-09 | 5 |
cartilaginous condensation | 7.26e-09 | 5 |
cartilage element | 7.26e-09 | 5 |
post-cranial axial skeletal system | 7.26e-09 | 5 |
vertebral column | 7.26e-09 | 5 |
intervertebral disk | 7.26e-09 | 5 |
intervertebral joint | 7.26e-09 | 5 |
hematopoietic system | 1.02e-08 | 98 |
blood island | 1.02e-08 | 98 |
cerebellum | 8.41e-08 | 6 |
rhombic lip | 8.41e-08 | 6 |
hemolymphoid system | 1.33e-07 | 108 |
nucleus pulposus | 3.33e-07 | 3 |
axial mesoderm | 3.33e-07 | 3 |
notochord | 3.33e-07 | 3 |
chordamesoderm | 3.33e-07 | 3 |