FFCP PHASE1:Hg19::chr11:694701..694759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:694701..694759,+ | |||
|description=CAGE_peak_at_chr11:694701..694759,+ | |description=CAGE_peak_at_chr11:694701..694759,+ | ||
|id=chr11:694701..694759,+ | |id=chr11:694701..694759,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.22e-15!254;CL:0002076!1.10e-14!43;CL:0000223!1.94e-10!59;CL:0002159!7.29e-09!13;CL:0000362!7.65e-08!8;CL:0002368!3.03e-07!13;CL:0000312!6.83e-07!5;CL:0002251!8.31e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.22e-15!254;CL:0002076!1.10e-14!43;CL:0000223!1.94e-10!59;CL:0002159!7.29e-09!13;CL:0000362!7.65e-08!8;CL:0002368!3.03e-07!13;CL:0000312!6.83e-07!5;CL:0002251!8.31e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.10e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.28e-09,42;CL:0000066,4.85e-09,253;CL:0000223,1.34e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.98e-11;10!UBERON:0005564;8.98e-11;10 | |||
|ontology_enrichment_disease=DOID:305!1.80e-14!106;DOID:0050687!1.74e-11!143;DOID:299!4.01e-08!25 | |ontology_enrichment_disease=DOID:305!1.80e-14!106;DOID:0050687!1.74e-11!143;DOID:299!4.01e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.20e-09;4!DOID:1612;2.20e-09;4!DOID:299;4.97e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.74e-09,4;DOID:1612,1.74e-09,4;DOID:305,4.43e-07,106;DOID:299,5.18e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-15!169;UBERON:0000925!1.11e-15!169;UBERON:0006595!1.11e-15!169;UBERON:0004921!4.64e-14!129;UBERON:0004185!4.64e-14!129;UBERON:0001007!4.21e-13!155;UBERON:0001555!4.21e-13!155;UBERON:0007026!4.21e-13!155;UBERON:0000077!6.07e-13!130;UBERON:0001004!1.00e-10!72;UBERON:0001041!2.68e-10!98;UBERON:0000065!4.66e-09!53;UBERON:0000464!3.95e-08!104;UBERON:0005178!3.01e-07!34;UBERON:0002224!3.01e-07!34;UBERON:0000466!4.54e-07!126;UBERON:0005181!6.47e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!1.11e-15!169;UBERON:0000925!1.11e-15!169;UBERON:0006595!1.11e-15!169;UBERON:0004921!4.64e-14!129;UBERON:0004185!4.64e-14!129;UBERON:0001007!4.21e-13!155;UBERON:0001555!4.21e-13!155;UBERON:0007026!4.21e-13!155;UBERON:0000077!6.07e-13!130;UBERON:0001004!1.00e-10!72;UBERON:0001041!2.68e-10!98;UBERON:0000065!4.66e-09!53;UBERON:0000464!3.95e-08!104;UBERON:0005178!3.01e-07!34;UBERON:0002224!3.01e-07!34;UBERON:0000466!4.54e-07!126;UBERON:0005181!6.47e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000485;1.78e-09;7!UBERON:0006562;2.81e-09;2!UBERON:0004921;6.78e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.68e-09,118;UBERON:0004119,6.83e-08,160;UBERON:0000925,6.83e-08,160;UBERON:0006595,6.83e-08,160;UBERON:0000485,2.20e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,3.67768489791571,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.88153966094968,0.364295288292542,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,6.14942192715568,0,0.439001141634502,3.37205259772859,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39695471483404,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0.40101294060657,10.5893137276281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,2.4277867405332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.384888450902048,0,4.3556393944529,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0.111443384277478,0,2.86493381685228,1.78178808499583,0.614321404198464,0,0,0,0,0,0,0.276283915531148,5.54252045279407,0,0,0,0.179736702294654,2.50629644545853,0,0,0,0,0.969332746095218,0,0,1.82299432759663,1.39935999993913,0,0.341380344856499,0.254253650292766,1.89110145414349,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.977826347298073,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,1.13082457147153,0,0,1.14994833854341,0.611030144933625,0,0.123563938946503,0,0,0,0,0.182454789215666,0.19566461893209,0,0.789168805698781,3.62972148145992,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.881931576729399,0.870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,2.03676934625681,0.0882561266915003,0.225980740780532,0,0,0,0.586654148204409,0,0.426905989478705,0,0.432271251462318,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0.828478110694391,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6488667138898,0,0,0,0,0,10.2112040635194,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0.781514011233092,1.04762677792569,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,2.93853583571069,0,0,0,1.13831095675649,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0.430227358820278,0,0,0,0.4582137370881,0,0,3.91494011292273,5.00566191437739,0.853425474875886,0,0,0,0,7.25212336732527,0.397901550322736,0,0.11294608203896,0,8.60488208330039,3.39566295674957,0,1.41095188908457,0,3.77082475362602,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0.730336388246517,1.37618785021362,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.305966489225945,0.801652215796681,9.18948995348449,0,8.63877159687929,13.9341347681213,0,0,4.05144565611864,0,0.322944549180031,0.496597714366863,0,0.190941474834495,0,3.9189014621453,1.36893320434112,3.7717149688169,0.358611026963382,0.332660356546013,0.325613074443898,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,3.67768489791571,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.88153966094968,0.364295288292542,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,6.14942192715568,0,0.439001141634502,3.37205259772859,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39695471483404,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0.40101294060657,10.5893137276281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,2.4277867405332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.384888450902048,0,4.3556393944529,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0.111443384277478,0,2.86493381685228,1.78178808499583,0.614321404198464,0,0,0,0,0,0,0.276283915531148,5.54252045279407,0,0,0,0.179736702294654,2.50629644545853,0,0,0,0,0.969332746095218,0,0,1.82299432759663,1.39935999993913,0,0.341380344856499,0.254253650292766,1.89110145414349,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.977826347298073,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,1.13082457147153,0,0,1.14994833854341,0.611030144933625,0,0.123563938946503,0,0,0,0,0.182454789215666,0.19566461893209,0,0.789168805698781,3.62972148145992,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.881931576729399,0.870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,2.03676934625681,0.0882561266915003,0.225980740780532,0,0,0,0.586654148204409,0,0.426905989478705,0,0.432271251462318,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0.828478110694391,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6488667138898,0,0,0,0,0,10.2112040635194,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0.781514011233092,1.04762677792569,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,2.93853583571069,0,0,0,1.13831095675649,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0.430227358820278,0,0,0,0.4582137370881,0,0,3.91494011292273,5.00566191437739,0.853425474875886,0,0,0,0,7.25212336732527,0.397901550322736,0,0.11294608203896,0,8.60488208330039,3.39566295674957,0,1.41095188908457,0,3.77082475362602,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0.730336388246517,1.37618785021362,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.305966489225945,0.801652215796681,9.18948995348449,0,8.63877159687929,13.9341347681213,0,0,4.05144565611864,0,0.322944549180031,0.496597714366863,0,0.190941474834495,0,3.9189014621453,1.36893320434112,3.7717149688169,0.358611026963382,0.332660356546013,0.325613074443898,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:694701..694759,+ | |short_description=p@chr11:694701..694759,+ | ||
}} | }} |
Latest revision as of 01:58, 24 July 2015
Short description: | p@chr11:694701..694759, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:694701..694759, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.28e-09 | 42 |
epithelial cell | 4.85e-09 | 253 |
endodermal cell | 1.34e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 6.68e-09 | 118 |
endoderm-derived structure | 6.83e-08 | 160 |
endoderm | 6.83e-08 | 160 |
presumptive endoderm | 6.83e-08 | 160 |
simple columnar epithelium | 2.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.74e-09 | 4 |
breast cancer | 1.74e-09 | 4 |
carcinoma | 4.43e-07 | 106 |
adenocarcinoma | 5.18e-07 | 25 |