FFCP PHASE1:Hg19::chr9:22264895..22264899,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:22264895..22264899,+ | |||
|description=CAGE_peak_at_chr9:22264895..22264899,+ | |description=CAGE_peak_at_chr9:22264895..22264899,+ | ||
|id=chr9:22264895..22264899,+ | |id=chr9:22264895..22264899,+ | ||
|ontology_enrichment_celltype=CL:0000064!6.88e-07!3;CL:0005012!6.88e-07!3;CL:0000067!6.88e-07!3;CL:0002304!6.88e-07!3 | |ontology_enrichment_celltype=CL:0000064!6.88e-07!3;CL:0005012!6.88e-07!3;CL:0000067!6.88e-07!3;CL:0002304!6.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.24e-33;3!CL:0000067;1.24e-33;3!CL:0005012;1.24e-33;3!CL:0002304;1.24e-33;3!CL:0000785;2.07e-12;1!CL:0002568;2.07e-12;1!CL:0000819;2.07e-12;1!CL:0000075;7.87e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.06e-33,3;CL:0000067,1.06e-33,3;CL:0005012,1.06e-33,3;CL:0002304,1.06e-33,3;CL:0000819,1.57e-12,1;CL:0002568,3.08e-12,1;CL:0000785,6.80e-07,2;CL:0000955,6.80e-07,2;CL:0000818,6.80e-07,2;CL:0000954,6.80e-07,2;CL:0000816,6.80e-07,2;CL:0000075,7.70e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000954;7.82e-07;2 | |||
|ontology_enrichment_disease=DOID:0050687!2.19e-11!143;DOID:162!4.88e-09!235;DOID:305!1.11e-08!106;DOID:14566!1.48e-08!239 | |ontology_enrichment_disease=DOID:0050687!2.19e-11!143;DOID:162!4.88e-09!235;DOID:305!1.11e-08!106;DOID:14566!1.48e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.67e-23;2!DOID:0060073;2.07e-12;1!DOID:8675;2.07e-12;1!DOID:3910;7.82e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.02e-24,2;DOID:0060073,1.57e-12,1;DOID:8675,1.57e-12,1;DOID:3910,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.50e-07!11;UBERON:0001778!6.88e-07!3;UBERON:0001775!6.88e-07!3 | |ontology_enrichment_uberon=UBERON:0007625!2.50e-07!11;UBERON:0001778!6.88e-07!3;UBERON:0001775!6.88e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.24e-33;3!UBERON:0001775;1.24e-33;3!UBERON:0000488;2.05e-25;4!UBERON:0002203;3.59e-17;6!UBERON:0001768;3.59e-17;6!UBERON:0002200;3.59e-17;6!UBERON:0007625;1.80e-16;11!UBERON:0001801;5.34e-13;14!UBERON:0010371;1.11e-12;31!UBERON:0000019;1.23e-09;19!UBERON:0000047;1.23e-09;19!UBERON:0004088;1.23e-09;19!UBERON:0010230;1.23e-09;19!UBERON:0006876;1.25e-09;11!UBERON:0000970;3.65e-09;20!UBERON:0002104;9.77e-09;21!UBERON:0001456;9.77e-09;21!UBERON:0000020;5.43e-08;23!UBERON:0001032;1.15e-07;24!UBERON:0004456;1.15e-07;24!UBERON:0004903;7.82e-07;2!UBERON:0002173;7.82e-07;2!UBERON:0002186;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.06e-33,3;UBERON:0001775,1.06e-33,3;UBERON:0000488,1.82e-25,4;UBERON:0002203,3.31e-17,6;UBERON:0001768,3.31e-17,6;UBERON:0002200,3.31e-17,6;UBERON:0007625,1.70e-16,11;UBERON:0001801,5.10e-13,14;UBERON:0006876,1.19e-09,11;UBERON:0000019,3.54e-09,20;UBERON:0000047,3.54e-09,20;UBERON:0010312,3.54e-09,20;UBERON:0004088,3.54e-09,20;UBERON:0010230,3.54e-09,20;UBERON:0003072,3.54e-09,20;UBERON:0004128,3.54e-09,20;UBERON:0003071,3.54e-09,20;UBERON:0000970,9.49e-09,21;UBERON:0002104,9.49e-09,21;UBERON:0001456,2.33e-08,22;UBERON:0000020,1.12e-07,24;UBERON:0001032,1.12e-07,24;UBERON:0004456,1.12e-07,24;UBERON:0004903,7.20e-07,2;UBERON:0002173,7.20e-07,2;UBERON:0002186,7.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,1.03988298880475,1.77383517970051,1.66886092816939,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.16344544182,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0.280660094433074,0.128139149255701,0,1.12597744800525,0,0,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0,0.640986253728404,0.742585499285292,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0,0,0,0,0,1.64209310294099,0.19566461893209,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.822251547880505,0,0,0.782205530939212,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0,0.509991088181609,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,1.18112977817699,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0.179287339332845,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0.328370082997356,0.170388021785422,0,0,0,0,0,0.855434189421647,0.704815022316672,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99968652739371,1.97143852804142,7.99302933925909,0.941063278792687,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,1.31570429747224,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0.982829546539238,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,1.06287460050841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.115525666150338,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,1.9110067515482,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0.352894871715692,1.20362050033752,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0,0,0.320182037633146,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,1.03988298880475,1.77383517970051,1.66886092816939,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.16344544182,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0.280660094433074,0.128139149255701,0,1.12597744800525,0,0,0,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0,0.640986253728404,0.742585499285292,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0,0,0,0,0,1.64209310294099,0.19566461893209,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.822251547880505,0,0,0.782205530939212,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0,0.509991088181609,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,1.18112977817699,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0.179287339332845,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0.328370082997356,0.170388021785422,0,0,0,0,0,0.855434189421647,0.704815022316672,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99968652739371,1.97143852804142,7.99302933925909,0.941063278792687,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,1.31570429747224,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0.982829546539238,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,1.06287460050841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.115525666150338,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,1.9110067515482,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0.352894871715692,1.20362050033752,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0,0,0.320182037633146,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr9:22264895..22264899,+ | |short_description=p@chr9:22264895..22264899,+ | ||
}} | }} |
Latest revision as of 01:11, 1 August 2015
Short description: | p@chr9:22264895..22264899, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:22264895..22264899, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.06e-33 | 3 |
ciliated epithelial cell | 1.06e-33 | 3 |
multi-ciliated epithelial cell | 1.06e-33 | 3 |
non-pigmented ciliary epithelial cell | 1.06e-33 | 3 |
B-1 B cell | 1.57e-12 | 1 |
mesenchymal stem cell of Wharton's jelly | 3.08e-12 | 1 |
mature B cell | 6.80e-07 | 2 |
pre-B-II cell | 6.80e-07 | 2 |
transitional stage B cell | 6.80e-07 | 2 |
small pre-B-II cell | 6.80e-07 | 2 |
immature B cell | 6.80e-07 | 2 |
columnar/cuboidal epithelial cell | 7.70e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.06e-33 | 3 |
ciliary body | 1.06e-33 | 3 |
atypical epithelium | 1.82e-25 | 4 |
vasculature of eye | 3.31e-17 | 6 |
uvea | 3.31e-17 | 6 |
vasculature of head | 3.31e-17 | 6 |
pigment epithelium of eye | 1.70e-16 | 11 |
anterior segment of eyeball | 5.10e-13 | 14 |
vasculature of organ | 1.19e-09 | 11 |
camera-type eye | 3.54e-09 | 20 |
simple eye | 3.54e-09 | 20 |
immature eye | 3.54e-09 | 20 |
ocular region | 3.54e-09 | 20 |
eyeball of camera-type eye | 3.54e-09 | 20 |
optic cup | 3.54e-09 | 20 |
optic vesicle | 3.54e-09 | 20 |
eye primordium | 3.54e-09 | 20 |
eye | 9.49e-09 | 21 |
visual system | 9.49e-09 | 21 |
face | 2.33e-08 | 22 |
sense organ | 1.12e-07 | 24 |
sensory system | 1.12e-07 | 24 |
entire sense organ system | 1.12e-07 | 24 |
bronchoalveolar duct junction | 7.20e-07 | 2 |
alveolar duct | 7.20e-07 | 2 |
bronchiole | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.02e-24 | 2 |
lymphatic system cancer | 1.57e-12 | 1 |
lymphosarcoma | 1.57e-12 | 1 |
lung adenocarcinoma | 7.20e-07 | 2 |