FFCP PHASE1:Hg19::chr17:18086766..18086771,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:18086766..18086771,+
|short_description=p21@ALKBH5
|description=CAGE_peak_21_at_ALKBH5_5end
|association_with_transcript=-95bp_to_ENST00000261650,NM_01775...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54890 | |EntrezGene=54890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25996 | |HGNC=25996 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P6C2 | |UniProt=Q6P6C2 | ||
|association_with_transcript=-95bp_to_ENST00000261650,NM_017758,uc010cpw.2_5end | |||
|cluster_id=chr17:18086766..18086771,+ | |||
|description=CAGE_peak_21_at_ALKBH5_5end | |||
|id=chr17:18086766..18086771,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.71e-14;3!CL:1000428;1.71e-14;3!CL:0002559;3.10e-09;5!CL:0002569;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.60e-14,3;CL:1000428,1.60e-14,3;CL:0002559,2.97e-09,5;CL:0002569,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.65e-17;10!UBERON:0005564;6.65e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.81e-40;1!UBERON:0000473;7.72e-21;8!UBERON:0003135;1.81e-15;11!UBERON:0000412;1.71e-14;3!UBERON:0001992;1.71e-14;3!UBERON:0002073;3.10e-09;5!UBERON:0002050;3.10e-09;5!UBERON:0005423;3.10e-09;5!UBERON:0000991;1.34e-08;21!UBERON:0003101;2.98e-08;22!UBERON:0000079;2.98e-08;22!UBERON:0003422;6.55e-08;6!UBERON:0003104;5.86e-07;7!UBERON:0009142;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000412,1.60e-14,3;UBERON:0001992,1.60e-14,3;UBERON:0002073,2.97e-09,5;UBERON:0005086,2.97e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003422,7.25e-08,6 | |||
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| ||
|short_description=p21@ALKBH5 | |||
}} | }} |
Latest revision as of 22:38, 18 September 2015
Short description: | p21@ALKBH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ALKBH5_5end |
Coexpression cluster: | NA |
Association with transcript: | -95bp_to_ENST00000261650, NM_017758, uc010cpw.2_5end |
EntrezGene: | ALKBH5 |
HGNC: | 25996 |
UniProt: | Q6P6C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.60e-14 | 3 |
stem cell of epidermis | 1.60e-14 | 3 |
hair follicle cell | 2.97e-09 | 5 |
mesenchymal stem cell of umbilical cord | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
dermal papilla | 1.60e-14 | 3 |
papillary layer of dermis | 1.60e-14 | 3 |
hair follicle | 2.97e-09 | 5 |
hair follicle placode | 2.97e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
mesenchyme of umbilical cord | 7.25e-08 | 6 |