FFCP PHASE1:Hg19::chr16:4421890..4421912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:4421890..4421912,- | |||
|description=CAGE_peak_at_chr16:4421890..4421912,- | |description=CAGE_peak_at_chr16:4421890..4421912,- | ||
|id=chr16:4421890..4421912,- | |id=chr16:4421890..4421912,- | ||
|ontology_enrichment_celltype=CL:0002602!1.20e-08!2;CL:0002583!2.15e-08!2 | |ontology_enrichment_celltype=CL:0002602!1.20e-08!2;CL:0002583!2.15e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002602;2.74e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,2.74e-50,2 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.37e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!1.26e-12!5;UBERON:0000982!1.26e-12!5;UBERON:0004770!1.26e-12!5;UBERON:0003586!1.42e-12!5;UBERON:0002072!2.52e-12!5;UBERON:0009568!1.20e-08!2;UBERON:0002216!1.20e-08!2;UBERON:0002209!1.20e-08!2;UBERON:0002213!1.20e-08!2;UBERON:0004267!1.20e-08!2;UBERON:0006444!1.20e-08!2;UBERON:0001995!1.20e-08!2;UBERON:0004715!1.20e-08!2;UBERON:0001468!1.20e-08!2;UBERON:0001130!1.20e-08!2;UBERON:0001066!1.20e-08!2 | |ontology_enrichment_uberon=UBERON:0004905!1.26e-12!5;UBERON:0000982!1.26e-12!5;UBERON:0004770!1.26e-12!5;UBERON:0003586!1.42e-12!5;UBERON:0002072!2.52e-12!5;UBERON:0009568!1.20e-08!2;UBERON:0002216!1.20e-08!2;UBERON:0002209!1.20e-08!2;UBERON:0002213!1.20e-08!2;UBERON:0004267!1.20e-08!2;UBERON:0006444!1.20e-08!2;UBERON:0001995!1.20e-08!2;UBERON:0004715!1.20e-08!2;UBERON:0001468!1.20e-08!2;UBERON:0001130!1.20e-08!2;UBERON:0001066!1.20e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006444;2.74e-50;2!UBERON:0001995;2.74e-50;2!UBERON:0004715;2.74e-50;2!UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0011135;4.21e-21;5!UBERON:0002216;4.21e-21;5!UBERON:0011134;4.21e-21;5!UBERON:0002209;4.21e-21;5!UBERON:0002213;4.21e-21;5!UBERON:0007844;4.21e-21;5!UBERON:0011138;4.21e-21;5!UBERON:0001130;4.21e-21;5!UBERON:0001066;4.21e-21;5!UBERON:0001468;4.21e-21;5!UBERON:0004905;9.39e-14;8!UBERON:0000982;9.39e-14;8!UBERON:0004770;9.39e-14;8!UBERON:0000075;1.45e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,2.74e-50,2;UBERON:0001995,2.74e-50,2;UBERON:0004715,2.74e-50,2;UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3;UBERON:0011135,4.21e-21,5;UBERON:0002216,4.21e-21,5;UBERON:0011134,4.21e-21,5;UBERON:0002209,4.21e-21,5;UBERON:0002213,4.21e-21,5;UBERON:0005856,4.21e-21,5;UBERON:0005866,4.21e-21,5;UBERON:0005863,4.21e-21,5;UBERON:0007844,4.21e-21,5;UBERON:0011138,4.21e-21,5;UBERON:0001130,4.21e-21,5;UBERON:0001066,4.21e-21,5;UBERON:0001468,4.21e-21,5;UBERON:0004905,9.39e-14,8;UBERON:0000982,9.39e-14,8;UBERON:0004770,9.39e-14,8;UBERON:0000075,1.45e-07,16 | |||
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|short_description=p@chr16:4421890..4421912,- | |short_description=p@chr16:4421890..4421912,- | ||
}} | }} |
Latest revision as of 08:50, 25 July 2015
Short description: | p@chr16:4421890..4421912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:4421890..4421912, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 2.74e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 2.74e-50 | 2 |
fibrocartilage | 2.74e-50 | 2 |
annulus fibrosus disci intervertebralis | 2.74e-50 | 2 |
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
intervertebral cartilage | 4.21e-21 | 5 |
symphysis | 4.21e-21 | 5 |
nonsynovial joint | 4.21e-21 | 5 |
fibrous joint | 4.21e-21 | 5 |
cartilaginous joint | 4.21e-21 | 5 |
developing mesenchymal condensation | 4.21e-21 | 5 |
pre-cartilage condensation | 4.21e-21 | 5 |
cartilaginous condensation | 4.21e-21 | 5 |
cartilage element | 4.21e-21 | 5 |
post-cranial axial skeletal system | 4.21e-21 | 5 |
vertebral column | 4.21e-21 | 5 |
intervertebral disk | 4.21e-21 | 5 |
intervertebral joint | 4.21e-21 | 5 |
articulation | 9.39e-14 | 8 |
skeletal joint | 9.39e-14 | 8 |
articular system | 9.39e-14 | 8 |
subdivision of skeletal system | 1.45e-07 | 16 |