FFCP PHASE1:Hg19::chr16:69958959..69958971,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11060 | |EntrezGene=11060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16804 | |HGNC=16804 | ||
|TSSclassifier=strong | |||
|UniProt=O00308,Q6ZTQ5 | |UniProt=O00308,Q6ZTQ5 | ||
|association_with_transcript=58bp_to_NM_199424,uc002exw.1_5end | |association_with_transcript=58bp_to_NM_199424,uc002exw.1_5end | ||
|cluster_id=chr16:69958959..69958971,+ | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_6_at_WWP2_5end | |description=CAGE_peak_6_at_WWP2_5end | ||
|id=chr16:69958959..69958971,+ | |id=chr16:69958959..69958971,+ | ||
|ontology_enrichment_celltype=CL:0000667!2.24e-07!6;CL:0000058!2.24e-07!6;CL:0000138!2.24e-07!6;CL:0000153!5.51e-07!9;CL:0000447!5.51e-07!9 | |ontology_enrichment_celltype=CL:0000667!2.24e-07!6;CL:0000058!2.24e-07!6;CL:0000138!2.24e-07!6;CL:0000153!5.51e-07!9;CL:0000447!5.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000138;5.15e-28;6!CL:0000153;6.21e-19;9!CL:0000447;6.21e-19;9!CL:0000327;1.25e-11;15!CL:0000499;9.68e-11;28!CL:0002573;2.97e-07;2!CL:0000135;2.97e-07;3!CL:0000388;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.40e-28,6;CL:0000138,5.40e-28,6;CL:0000153,6.40e-19,9;CL:0000447,6.40e-19,9;CL:0000327,1.27e-11,15;CL:0000499,9.32e-11,28;CL:0000135,2.63e-07,3;CL:0000388,2.63e-07,3;CL:0002573,2.79e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.80e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1192;7.46e-25;3!DOID:3371;2.06e-19;1!DOID:4549;2.06e-19;1!DOID:5861;2.06e-19;1!DOID:6496;2.06e-19;1!DOID:3369;2.06e-19;1!DOID:3193;2.99e-10;2!DOID:962;2.99e-10;2!DOID:3093;6.26e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,6.22e-25,3;DOID:3369,1.88e-19,1;DOID:3371,2.25e-19,1;DOID:4549,2.25e-19,1;DOID:5861,2.25e-19,1;DOID:6496,2.25e-19,1;DOID:3193,2.72e-10,2;DOID:962,2.72e-10,2;DOID:3093,5.98e-07,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.91e-19;1!UBERON:0003127;1.80e-10;2!UBERON:0000341;2.99e-10;2!UBERON:0002418;2.40e-07;3!UBERON:0004755;2.40e-07;3!UBERON:0007846;2.97e-07;3!UBERON:0000043;2.97e-07;3!UBERON:0007845;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.69e-19,1;UBERON:0003127,1.72e-10,2;UBERON:0000341,2.99e-10,2;UBERON:0002418,2.47e-07,3;UBERON:0004755,2.47e-07,3;UBERON:0007846,2.63e-07,3;UBERON:0000043,2.63e-07,3;UBERON:0007845,2.63e-07,3 | |||
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| ||
|short_description=p6@WWP2 | |short_description=p6@WWP2 | ||
}} | }} |
Latest revision as of 15:45, 17 September 2015
Short description: | p6@WWP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WWP2_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 58bp_to_NM_199424, uc002exw.1_5end |
EntrezGene: | WWP2 |
HGNC: | 16804 |
UniProt: | O00308Q6ZTQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.40e-28 | 6 |
chondrocyte | 5.40e-28 | 6 |
GAG secreting cell | 6.40e-19 | 9 |
carbohydrate secreting cell | 6.40e-19 | 9 |
extracellular matrix secreting cell | 1.27e-11 | 15 |
stromal cell | 9.32e-11 | 28 |
fibrocyte | 2.63e-07 | 3 |
tendon cell | 2.63e-07 | 3 |
Schwann cell | 2.79e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.69e-19 | 1 |
open tracheal system trachea | 1.72e-10 | 2 |
throat | 2.99e-10 | 2 |
cartilage tissue | 2.47e-07 | 3 |
skeletal tissue | 2.47e-07 | 3 |
dense regular connective tissue | 2.63e-07 | 3 |
tendon | 2.63e-07 | 3 |
regular connective tissue | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 6.22e-25 | 3 |
peripheral primitive neuroectodermal tumor | 1.88e-19 | 1 |
chondrosarcoma | 2.25e-19 | 1 |
extraosseous chondrosarcoma | 2.25e-19 | 1 |
myxoid chondrosarcoma | 2.25e-19 | 1 |
extraskeletal myxoid chondrosarcoma | 2.25e-19 | 1 |
peripheral nerve sheath neoplasm | 2.72e-10 | 2 |
neurofibroma | 2.72e-10 | 2 |
nervous system cancer | 5.98e-07 | 11 |