FFCP PHASE1:Hg19::chr16:84793065..84793074,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84793065..84793074,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr16:84793065..84793074,+ | |description=CAGE_peak_at_chr16:84793065..84793074,+ | ||
|id=chr16:84793065..84793074,+ | |id=chr16:84793065..84793074,+ | ||
|ontology_enrichment_celltype=CL:0000624!5.79e-22!6;CL:0000898!6.04e-12!3;CL:0000738!1.37e-11!140;CL:0000842!2.31e-11!3;CL:0000791!3.33e-11!18;CL:0000789!3.33e-11!18;CL:0002420!3.33e-11!18;CL:0002419!3.33e-11!18;CL:0000790!3.33e-11!18;CL:0000810!1.12e-09!1;CL:0000895!1.12e-09!1;CL:0002436!1.12e-09!1;CL:0002427!1.12e-09!1;CL:0002428!1.12e-09!1;CL:0002429!1.12e-09!1;CL:0002433!1.12e-09!1;CL:0002431!1.12e-09!1;CL:0002432!1.12e-09!1;CL:0002087!6.06e-09!119;CL:0000037!6.57e-09!172;CL:0000566!6.57e-09!172;CL:0000224!9.62e-09!4;CL:0000988!2.90e-08!182;CL:0000084!5.18e-08!25;CL:0000827!5.18e-08!25;CL:0002031!3.81e-07!124;CL:0002032!6.08e-07!165;CL:0000837!6.08e-07!165 | |ontology_enrichment_celltype=CL:0000624!5.79e-22!6;CL:0000898!6.04e-12!3;CL:0000738!1.37e-11!140;CL:0000842!2.31e-11!3;CL:0000791!3.33e-11!18;CL:0000789!3.33e-11!18;CL:0002420!3.33e-11!18;CL:0002419!3.33e-11!18;CL:0000790!3.33e-11!18;CL:0000810!1.12e-09!1;CL:0000895!1.12e-09!1;CL:0002436!1.12e-09!1;CL:0002427!1.12e-09!1;CL:0002428!1.12e-09!1;CL:0002429!1.12e-09!1;CL:0002433!1.12e-09!1;CL:0002431!1.12e-09!1;CL:0002432!1.12e-09!1;CL:0002087!6.06e-09!119;CL:0000037!6.57e-09!172;CL:0000566!6.57e-09!172;CL:0000224!9.62e-09!4;CL:0000988!2.90e-08!182;CL:0000084!5.18e-08!25;CL:0000827!5.18e-08!25;CL:0002031!3.81e-07!124;CL:0002032!6.08e-07!165;CL:0000837!6.08e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000895;8.34e-34;1!CL:0000624;9.46e-23;6!CL:0000898;3.06e-12;3!CL:0000791;2.80e-08;18!CL:0000789;2.80e-08;18!CL:0002419;2.80e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,7.06e-34,1;CL:0000895,7.06e-34,1;CL:0002436,7.06e-34,1;CL:0002427,7.06e-34,1;CL:0002428,7.06e-34,1;CL:0002429,7.06e-34,1;CL:0002433,7.06e-34,1;CL:0002431,7.06e-34,1;CL:0002432,7.06e-34,1;CL:0000624,9.46e-23,6;CL:0000893,1.07e-17,2;CL:0002489,1.07e-17,2;CL:0000809,1.07e-17,2;CL:0000808,1.07e-17,2;CL:0000894,1.07e-17,2;CL:0000806,1.07e-17,2;CL:0000807,1.07e-17,2;CL:0000805,1.07e-17,2;CL:0002425,1.07e-17,2;CL:0000898,2.89e-12,3;CL:0000791,2.80e-08,18;CL:0000789,2.80e-08,18;CL:0002420,2.80e-08,18;CL:0002419,2.80e-08,18;CL:0000790,2.80e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002427;8.34e-34;1!CL:0002425;1.17e-17;2!CL:0000790;2.80e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.57e-09,4;UBERON:0005058,1.57e-09,4;UBERON:0009113,1.57e-09,4;UBERON:0003295,1.57e-09,4;UBERON:0005562,1.57e-09,4;UBERON:0003351,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,1.02800749499755,0,0,0,0,0,0.589211814949674,0.443067789167242,0,0,0,0,0,0,2.37258501059297,2.40786745280742,0,0,1.14966148080576,4.46715679127419,2.53019692019503,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,1.02800749499755,0,0,0,0,0,0.589211814949674,0.443067789167242,0,0,0,0,0,0,2.37258501059297,2.40786745280742,0,0,1.14966148080576,4.46715679127419,2.53019692019503,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:84793065..84793074,+ | |short_description=p@chr16:84793065..84793074,+ | ||
}} | }} |
Latest revision as of 12:56, 25 July 2015
Short description: | p@chr16:84793065..84793074, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84793065..84793074, + |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 7.06e-34 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 7.06e-34 | 1 |
mature CD4 single-positive thymocyte | 7.06e-34 | 1 |
resting double-positive thymocyte | 7.06e-34 | 1 |
double-positive blast | 7.06e-34 | 1 |
CD69-positive double-positive thymocyte | 7.06e-34 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 7.06e-34 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 7.06e-34 | 1 |
CD24-positive, CD4 single-positive thymocyte | 7.06e-34 | 1 |
CD4-positive, alpha-beta T cell | 9.46e-23 | 6 |
thymocyte | 1.07e-17 | 2 |
double negative thymocyte | 1.07e-17 | 2 |
double-positive, alpha-beta thymocyte | 1.07e-17 | 2 |
DN4 thymocyte | 1.07e-17 | 2 |
DN1 thymic pro-T cell | 1.07e-17 | 2 |
DN2 thymocyte | 1.07e-17 | 2 |
DN3 thymocyte | 1.07e-17 | 2 |
immature single positive thymocyte | 1.07e-17 | 2 |
early T lineage precursor | 1.07e-17 | 2 |
naive T cell | 2.89e-12 | 3 |
mature alpha-beta T cell | 2.80e-08 | 18 |
alpha-beta T cell | 2.80e-08 | 18 |
immature T cell | 2.80e-08 | 18 |
mature T cell | 2.80e-08 | 18 |
immature alpha-beta T cell | 2.80e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.57e-09 | 4 |
hemolymphoid system gland | 1.57e-09 | 4 |
thymic region | 1.57e-09 | 4 |
pharyngeal gland | 1.57e-09 | 4 |
thymus primordium | 1.57e-09 | 4 |
pharyngeal epithelium | 8.97e-07 | 6 |