FFCP PHASE1:Hg19::chr17:39197699..39197703,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81851 | |EntrezGene=81851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16772 | |HGNC=16772 | ||
|TSSclassifier=strong | |||
|UniProt=Q07627,Q8IUG1 | |UniProt=Q07627,Q8IUG1 | ||
|association_with_transcript=9bp_to_ENST00000306271,NM_030967,uc002hvw.1_5end | |association_with_transcript=9bp_to_ENST00000306271,NM_030967,uc002hvw.1_5end | ||
|cluster_id=chr17:39197699..39197703,- | |||
|description=CAGE_peak_1_at_KRTAP1-1_5end | |description=CAGE_peak_1_at_KRTAP1-1_5end | ||
|id=chr17:39197699..39197703,- | |id=chr17:39197699..39197703,- | ||
|ontology_enrichment_celltype=CL:0002620!9.25e-23!23;CL:0000057!2.43e-20!75;CL:0000055!1.04e-13!180;CL:0002334!4.96e-10!12;CL:0000515!5.09e-10!4;CL:0000048!6.83e-07!430 | |ontology_enrichment_celltype=CL:0002620!9.25e-23!23;CL:0000057!2.43e-20!75;CL:0000055!1.04e-13!180;CL:0002334!4.96e-10!12;CL:0000515!5.09e-10!4;CL:0000048!6.83e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000056;6.30e-23;4!CL:0002620;7.15e-18;23!CL:0000515;1.79e-17;3!CL:0000680;3.61e-13;7!CL:0002556;5.07e-09;6!CL:0002582;3.00e-08;3!CL:0000057;2.12e-07;73!CL:0000228;3.51e-07;1!CL:0002372;3.51e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,7.90e-23,4;CL:0000057,3.27e-19,76;CL:0002620,8.44e-18,23;CL:0002556,5.43e-09,6;CL:0002582,2.64e-08,3;CL:0000228,3.52e-07,1;CL:0002372,3.52e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;6.30e-23;4 | |||
|ontology_enrichment_disease=DOID:17!6.90e-11!5;DOID:450!6.90e-11!5;DOID:66!6.90e-11!5;DOID:423!6.90e-11!5;DOID:0080000!6.90e-11!5;DOID:11722!6.90e-11!5 | |ontology_enrichment_disease=DOID:17!6.90e-11!5;DOID:450!6.90e-11!5;DOID:66!6.90e-11!5;DOID:423!6.90e-11!5;DOID:0080000!6.90e-11!5;DOID:11722!6.90e-11!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.07e-10;5!DOID:450;2.07e-10;5!DOID:66;2.07e-10;5!DOID:423;2.07e-10;5!DOID:0080000;2.07e-10;5!DOID:11722;2.07e-10;5!DOID:4235;4.69e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.10e-10,5;DOID:450,2.10e-10,5;DOID:66,2.10e-10,5;DOID:423,2.10e-10,5;DOID:0080000,2.10e-10,5;DOID:11722,2.10e-10,5;DOID:4235,4.18e-07,1;DOID:2513,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.40e-17!45;UBERON:0002416!2.40e-17!45;UBERON:0002097!2.10e-16!40;UBERON:0003102!6.32e-14!95 | |ontology_enrichment_uberon=UBERON:0002199!2.40e-17!45;UBERON:0002416!2.40e-17!45;UBERON:0002097!2.10e-16!40;UBERON:0003102!6.32e-14!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.30e-18;41!UBERON:0002199;4.08e-13;46!UBERON:0002416;4.08e-13;46!UBERON:0003102;8.07e-10;50!UBERON:0001758;5.07e-09;6!UBERON:0003672;5.07e-09;6!UBERON:0001134;1.60e-08;16!UBERON:0002036;1.60e-08;16!UBERON:0003129;8.59e-08;7!UBERON:0007029;3.13e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.50e-20,41;UBERON:0002199,1.61e-17,46;UBERON:0002416,1.61e-17,46;UBERON:0003102,2.55e-12,99;UBERON:0001758,5.43e-09,6;UBERON:0003672,5.43e-09,6;UBERON:0003129,9.11e-08,7;UBERON:0007029,3.13e-07,1 | |||
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| ||
|short_description=p1@KRTAP1-1 | |short_description=p1@KRTAP1-1 | ||
}} | }} |
Latest revision as of 04:29, 20 September 2015
Short description: | p1@KRTAP1-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP1-1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000306271, NM_030967, uc002hvw.1_5end |
EntrezGene: | KRTAP1-1 |
HGNC: | 16772 |
UniProt: | Q07627Q8IUG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 7.90e-23 | 4 |
fibroblast | 3.27e-19 | 76 |
skin fibroblast | 8.44e-18 | 23 |
fibroblast of periodontium | 5.43e-09 | 6 |
visceral preadipocyte | 2.64e-08 | 3 |
multinucleate cell | 3.52e-07 | 1 |
myotube | 3.52e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.50e-20 | 41 |
integument | 1.61e-17 | 46 |
integumental system | 1.61e-17 | 46 |
surface structure | 2.55e-12 | 99 |
periodontium | 5.43e-09 | 6 |
dentition | 5.43e-09 | 6 |
skull | 9.11e-08 | 7 |
surface | 3.13e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.10e-10 | 5 |
myotonic disease | 2.10e-10 | 5 |
muscle tissue disease | 2.10e-10 | 5 |
myopathy | 2.10e-10 | 5 |
muscular disease | 2.10e-10 | 5 |
myotonic dystrophy | 2.10e-10 | 5 |
spindle cell sarcoma | 4.18e-07 | 1 |
basal cell carcinoma | 9.79e-07 | 1 |