FFCP PHASE1:Hg19::chrX:152486108..152486123,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4100 | |EntrezGene=4100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6796 | |HGNC=6796 | ||
|TSSclassifier=strong | |||
|UniProt=P43355 | |UniProt=P43355 | ||
|association_with_transcript=0bp_to_ENST00000356661,NM_004988,uc004fhf.2_5end | |association_with_transcript=0bp_to_ENST00000356661,NM_004988,uc004fhf.2_5end | ||
|cluster_id=chrX:152486108..152486123,- | |||
|coexpression_cluster_id=C4858 | |||
|description=CAGE_peak_1_at_MAGEA1_5end | |description=CAGE_peak_1_at_MAGEA1_5end | ||
|id=chrX:152486108..152486123,- | |id=chrX:152486108..152486123,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.17e-20!235;DOID:14566!5.14e-20!239;DOID:0050687!6.86e-15!143;DOID:1036!2.15e-11!8;DOID:0050686!2.82e-09!137;DOID:305!2.01e-08!106;DOID:1909!2.33e-08!2;DOID:4231!3.23e-08!2;DOID:1907!3.23e-08!2;DOID:1115!5.11e-08!20 | |ontology_enrichment_disease=DOID:162!1.17e-20!235;DOID:14566!5.14e-20!239;DOID:0050687!6.86e-15!143;DOID:1036!2.15e-11!8;DOID:0050686!2.82e-09!137;DOID:305!2.01e-08!106;DOID:1909!2.33e-08!2;DOID:4231!3.23e-08!2;DOID:1907!3.23e-08!2;DOID:1115!5.11e-08!20 | ||
|ontology_enrichment_disease_v019=DOID:1036;5.01e-14;8!DOID:0060085;1.88e-08;1!DOID:3165;1.88e-08;1!DOID:0060121;1.88e-08;1!DOID:2438;1.88e-08;1!DOID:4418;1.88e-08;1!DOID:4960;2.33e-08;1!DOID:0070004;2.33e-08;1!DOID:0050619;6.24e-08;1!DOID:1357;6.24e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.01e-14,8;DOID:162,2.93e-11,235;DOID:14566,6.18e-11,239;DOID:0050686,9.63e-10,137;DOID:2531,1.46e-09,51;DOID:0060083,1.46e-09,51;DOID:0060085,2.02e-08,1;DOID:3165,2.02e-08,1;DOID:0060121,2.02e-08,1;DOID:2438,2.02e-08,1;DOID:4418,2.02e-08,1;DOID:4960,2.17e-08,1;DOID:0070004,2.17e-08,1;DOID:0050619,5.82e-08,1;DOID:1357,5.82e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;4.11e-08;1!UBERON:0009842;4.11e-08;1!UBERON:0003704;4.11e-08;1!UBERON:0001171;4.11e-08;1!UBERON:0001172;4.11e-08;1!UBERON:0001764;6.24e-08;1!UBERON:0001825;6.24e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.11e-08,1;UBERON:0009842,4.11e-08,1;UBERON:0003704,4.11e-08,1;UBERON:0001171,4.11e-08,1;UBERON:0001172,4.11e-08,1;UBERON:0001764,5.82e-08,1;UBERON:0001825,5.82e-08,1 | |||
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| ||
|short_description=p1@MAGEA1 | |short_description=p1@MAGEA1 | ||
}} | }} |
Latest revision as of 23:21, 19 September 2015
Short description: | p1@MAGEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAGEA1_5end |
Coexpression cluster: | C4858_small_large_melanoma_lymphangiectasia_Saos2_endometrial_fibrous |
Association with transcript: | 0bp_to_ENST00000356661, NM_004988, uc004fhf.2_5end |
EntrezGene: | MAGEA1 |
HGNC: | 6796 |
UniProt: | P43355 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 4.11e-08 | 1 |
acinus | 4.11e-08 | 1 |
intrahepatic bile duct | 4.11e-08 | 1 |
portal lobule | 4.11e-08 | 1 |
hepatic acinus | 4.11e-08 | 1 |
maxillary sinus | 5.82e-08 | 1 |
paranasal sinus | 5.82e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.01e-14 | 8 |
cancer | 2.93e-11 | 235 |
disease of cellular proliferation | 6.18e-11 | 239 |
organ system cancer | 9.63e-10 | 137 |
hematologic cancer | 1.46e-09 | 51 |
immune system cancer | 1.46e-09 | 51 |
organ system benign neoplasm | 2.02e-08 | 1 |
skin benign neoplasm | 2.02e-08 | 1 |
integumentary system benign neoplasm | 2.02e-08 | 1 |
dermis tumor | 2.02e-08 | 1 |
cutaneous fibrous histiocytoma | 2.02e-08 | 1 |
bone marrow cancer | 2.17e-08 | 1 |
myeloma | 2.17e-08 | 1 |
paranasal sinus cancer | 5.82e-08 | 1 |
maxillary sinus cancer | 5.82e-08 | 1 |