FFCP PHASE1:Hg19::chr19:12708113..12708120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57474 | |EntrezGene=57474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23705 | |HGNC=23705 | ||
|TSSclassifier=strong | |||
|UniProt=C9JID3 | |UniProt=C9JID3 | ||
|association_with_transcript=4bp_to_ENST00000440366_5end | |association_with_transcript=4bp_to_ENST00000440366_5end | ||
|cluster_id=chr19:12708113..12708120,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_7_at_ZNF490_5end | |description=CAGE_peak_7_at_ZNF490_5end | ||
|id=chr19:12708113..12708120,- | |id=chr19:12708113..12708120,- | ||
|ontology_enrichment_celltype=CL:0000039!3.58e-31!7;CL:0000586!3.58e-31!7;CL:0002566!3.15e-14!1 | |ontology_enrichment_celltype=CL:0000039!3.58e-31!7;CL:0000586!3.58e-31!7;CL:0002566!3.15e-14!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.18e-63;7!CL:0000586;1.18e-63;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.06e-63,7;CL:0000586,1.06e-63,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.08e-45;10!UBERON:0005564;6.08e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!1.14e-21!22;DOID:2994!1.14e-21!22 | |ontology_enrichment_disease=DOID:3095!1.14e-21!22;DOID:2994!1.14e-21!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.74e-21;22!DOID:2994;4.74e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.58e-21,22;DOID:2994,4.58e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.85e-42!8;UBERON:0003135!1.96e-30!11;UBERON:0000991!1.21e-22!21;UBERON:0009196!1.21e-22!21;UBERON:0009117!1.21e-22!21;UBERON:0005564!1.21e-22!21;UBERON:0004176!1.32e-21!22;UBERON:0003101!2.97e-15!22;UBERON:0000079!2.97e-15!22;UBERON:0001874!1.23e-14!1;UBERON:0002323!3.41e-10!46;UBERON:0003133!9.34e-10!48;UBERON:0004458!1.50e-09!49;UBERON:0005156!7.14e-08!59;UBERON:0000990!7.14e-08!59;UBERON:0003886!2.38e-07!63 | |ontology_enrichment_uberon=UBERON:0000473!8.85e-42!8;UBERON:0003135!1.96e-30!11;UBERON:0000991!1.21e-22!21;UBERON:0009196!1.21e-22!21;UBERON:0009117!1.21e-22!21;UBERON:0005564!1.21e-22!21;UBERON:0004176!1.32e-21!22;UBERON:0003101!2.97e-15!22;UBERON:0000079!2.97e-15!22;UBERON:0001874!1.23e-14!1;UBERON:0002323!3.41e-10!46;UBERON:0003133!9.34e-10!48;UBERON:0004458!1.50e-09!49;UBERON:0005156!7.14e-08!59;UBERON:0000990!7.14e-08!59;UBERON:0003886!2.38e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.32e-56;8!UBERON:0003135;5.73e-41;11!UBERON:0000991;5.30e-22;21!UBERON:0003101;4.74e-21;22!UBERON:0000079;4.74e-21;22!UBERON:0002323;1.04e-10;45!UBERON:0003133;6.61e-10;44!UBERON:0000922;1.28e-08;49!UBERON:0002553;2.52e-07;52!UBERON:0005156;2.89e-07;59!UBERON:0000990;2.89e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.66e-56,8;UBERON:0003135,5.35e-41,11;UBERON:0000991,5.11e-22,21;UBERON:0009196,5.11e-22,21;UBERON:0009117,5.11e-22,21;UBERON:0005564,5.11e-22,21;UBERON:0004176,4.58e-21,22;UBERON:0003101,4.58e-21,22;UBERON:0000079,4.58e-21,22;UBERON:0002323,1.39e-10,46;UBERON:0003133,3.53e-10,48;UBERON:0004458,5.47e-10,49;UBERON:0003886,3.82e-09,54;UBERON:0005156,1.93e-08,59;UBERON:0000990,1.93e-08,59;UBERON:0002553,3.42e-08,61 | |||
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|short_description=p7@ZNF490 | |short_description=p7@ZNF490 | ||
}} | }} |
Latest revision as of 19:06, 15 September 2015
Short description: | p7@ZNF490 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ZNF490_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 4bp_to_ENST00000440366_5end |
EntrezGene: | ZNF490 |
HGNC: | 23705 |
UniProt: | C9JID3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.06e-63 | 7 |
germ cell | 1.06e-63 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.66e-56 | 8 |
male reproductive organ | 5.35e-41 | 11 |
gonad | 5.11e-22 | 21 |
indifferent external genitalia | 5.11e-22 | 21 |
indifferent gonad | 5.11e-22 | 21 |
gonad primordium | 5.11e-22 | 21 |
external genitalia | 4.58e-21 | 22 |
male organism | 4.58e-21 | 22 |
male reproductive system | 4.58e-21 | 22 |
body cavity | 1.39e-10 | 46 |
reproductive organ | 3.53e-10 | 48 |
body cavity or lining | 5.47e-10 | 49 |
body cavity precursor | 3.82e-09 | 54 |
reproductive structure | 1.93e-08 | 59 |
reproductive system | 1.93e-08 | 59 |
anatomical cavity | 3.42e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.58e-21 | 22 |
germ cell cancer | 4.58e-21 | 22 |