FFCP PHASE1:Hg19::chr1:1297175..1297180,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54587 | |EntrezGene=54587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7542 | |HGNC=7542 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTR6 | |UniProt=B3KTR6 | ||
|association_with_transcript=-18bp_to_ENST00000378864,ENST00000477278,uc001afa.2_5end | |association_with_transcript=-18bp_to_ENST00000378864,ENST00000477278,uc001afa.2_5end | ||
|cluster_id=chr1:1297175..1297180,- | |||
|description=CAGE_peak_13_at_MXRA8_5end | |description=CAGE_peak_13_at_MXRA8_5end | ||
|id=chr1:1297175..1297180,- | |id=chr1:1297175..1297180,- | ||
|ontology_enrichment_celltype=CL:0000057!2.04e-13!75;CL:0000055!1.68e-10!180;CL:0000133!9.80e-09!59;CL:0002552!4.02e-08!5;CL:0002559!1.40e-07!4;CL:0000221!5.45e-07!71 | |ontology_enrichment_celltype=CL:0000057!2.04e-13!75;CL:0000055!1.68e-10!180;CL:0000133!9.80e-09!59;CL:0002552!4.02e-08!5;CL:0002559!1.40e-07!4;CL:0000221!5.45e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.58e-25;3!CL:1000428;1.58e-25;3!CL:0000197;5.69e-23;6!CL:0000098;5.69e-23;6!CL:0002167;5.69e-23;6!CL:0002575;1.13e-17;2!CL:0002549;3.66e-17;2!CL:0002559;1.42e-15;5!CL:0002541;1.29e-12;3!CL:0000669;2.68e-09;4!CL:0000349;2.86e-07;19!CL:0000710;5.22e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.46e-25,3;CL:1000428,1.46e-25,3;CL:0000197,5.09e-23,6;CL:0000098,5.09e-23,6;CL:0002167,5.09e-23,6;CL:0002575,1.34e-17,2;CL:0002549,2.22e-17,2;CL:0002559,1.35e-15,5;CL:0002541,1.29e-12,3;CL:0000669,2.91e-09,4;CL:0000133,8.26e-08,59;CL:0000349,2.67e-07,19;CL:0000710,5.06e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.74e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;6.88e-10;1!DOID:10165;6.88e-10;1!DOID:1798;6.88e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.31e-10,1;DOID:10165,6.31e-10,1;DOID:1798,6.31e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000924!2.90e-17!173;UBERON:0006601!2.90e-17!173;UBERON:0004121!4.06e-17!169;UBERON:0005631!1.25e-14!14;UBERON:0000158!1.25e-14!14;UBERON:0000033!1.07e-12!123;UBERON:0003124!1.18e-11!7;UBERON:0000153!1.53e-11!129;UBERON:0007811!1.53e-11!129;UBERON:0002200!1.10e-10!11;UBERON:0006876!1.10e-10!11;UBERON:0000064!9.58e-10!219;UBERON:0002346!2.34e-09!90;UBERON:0003075!2.84e-09!86;UBERON:0007284!2.84e-09!86;UBERON:0002616!1.02e-08!59;UBERON:0000478!1.48e-08!24;UBERON:0004923!1.55e-08!57;UBERON:0001017!2.00e-08!82;UBERON:0005743!2.02e-08!86;UBERON:0000955!9.85e-08!69;UBERON:0006238!9.85e-08!69;UBERON:0000073!1.17e-07!94;UBERON:0001016!1.17e-07!94;UBERON:0002073!1.40e-07!4;UBERON:0005086!1.40e-07!4;UBERON:0000475!3.26e-07!365;UBERON:0001987!3.38e-07!4;UBERON:0004340!3.38e-07!4 | |ontology_enrichment_uberon=UBERON:0000924!2.90e-17!173;UBERON:0006601!2.90e-17!173;UBERON:0004121!4.06e-17!169;UBERON:0005631!1.25e-14!14;UBERON:0000158!1.25e-14!14;UBERON:0000033!1.07e-12!123;UBERON:0003124!1.18e-11!7;UBERON:0000153!1.53e-11!129;UBERON:0007811!1.53e-11!129;UBERON:0002200!1.10e-10!11;UBERON:0006876!1.10e-10!11;UBERON:0000064!9.58e-10!219;UBERON:0002346!2.34e-09!90;UBERON:0003075!2.84e-09!86;UBERON:0007284!2.84e-09!86;UBERON:0002616!1.02e-08!59;UBERON:0000478!1.48e-08!24;UBERON:0004923!1.55e-08!57;UBERON:0001017!2.00e-08!82;UBERON:0005743!2.02e-08!86;UBERON:0000955!9.85e-08!69;UBERON:0006238!9.85e-08!69;UBERON:0000073!1.17e-07!94;UBERON:0001016!1.17e-07!94;UBERON:0002073!1.40e-07!4;UBERON:0005086!1.40e-07!4;UBERON:0000475!3.26e-07!365;UBERON:0001987!3.38e-07!4;UBERON:0004340!3.38e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.58e-25;3!UBERON:0001992;1.58e-25;3!UBERON:0005629;3.66e-17;2!UBERON:0005358;3.66e-17;2!UBERON:0001886;3.66e-17;2!UBERON:0004086;3.66e-17;2!UBERON:0005282;3.66e-17;2!UBERON:0005281;3.66e-17;2!UBERON:0002073;1.42e-15;5!UBERON:0003124;1.29e-12;3!UBERON:0000920;1.29e-12;3!UBERON:0002363;3.74e-10;1!UBERON:0002067;6.86e-09;9!UBERON:0005631;3.22e-08;10!UBERON:0000158;3.22e-08;10!UBERON:0005284;2.09e-07;5!UBERON:0006876;3.53e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.46e-25,3;UBERON:0001992,1.46e-25,3;UBERON:0005629,2.22e-17,2;UBERON:0005358,2.22e-17,2;UBERON:0001886,2.22e-17,2;UBERON:0004086,2.22e-17,2;UBERON:0005282,2.22e-17,2;UBERON:0005281,2.22e-17,2;UBERON:0002073,1.35e-15,5;UBERON:0005086,1.35e-15,5;UBERON:0000920,1.29e-12,3;UBERON:0003124,1.41e-11,7;UBERON:0002363,3.74e-10,1;UBERON:0007645,3.74e-10,1;UBERON:0007647,3.74e-10,1;UBERON:0010115,3.74e-10,1;UBERON:0005631,7.33e-10,14;UBERON:0000158,7.33e-10,14;UBERON:0002067,6.68e-09,9;UBERON:0004016,6.68e-09,9;UBERON:0010083,6.68e-09,9;UBERON:0005284,1.72e-07,5;UBERON:0006876,3.38e-07,11;UBERON:0004923,4.82e-07,66 | |||
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|short_description=p13@MXRA8 | |short_description=p13@MXRA8 | ||
}} | }} |
Latest revision as of 15:06, 16 September 2015
Short description: | p13@MXRA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MXRA8_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000378864, ENST00000477278, uc001afa.2_5end |
EntrezGene: | MXRA8 |
HGNC: | 7542 |
UniProt: | B3KTR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.46e-25 | 3 |
stem cell of epidermis | 1.46e-25 | 3 |
receptor cell | 5.09e-23 | 6 |
sensory epithelial cell | 5.09e-23 | 6 |
olfactory epithelial cell | 5.09e-23 | 6 |
central nervous system pericyte | 1.34e-17 | 2 |
fibroblast of choroid plexus | 2.22e-17 | 2 |
hair follicle cell | 1.35e-15 | 5 |
chorionic membrane mesenchymal stem cell | 1.29e-12 | 3 |
pericyte cell | 2.91e-09 | 4 |
neurectodermal cell | 8.26e-08 | 59 |
extraembryonic cell | 2.67e-07 | 19 |
neurecto-epithelial cell | 5.06e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.46e-25 | 3 |
papillary layer of dermis | 1.46e-25 | 3 |
vascular plexus | 2.22e-17 | 2 |
ventricle of nervous system | 2.22e-17 | 2 |
choroid plexus | 2.22e-17 | 2 |
brain ventricle | 2.22e-17 | 2 |
ventricular system of brain | 2.22e-17 | 2 |
ventricular system of central nervous system | 2.22e-17 | 2 |
hair follicle | 1.35e-15 | 5 |
hair follicle placode | 1.35e-15 | 5 |
egg chorion | 1.29e-12 | 3 |
chorion | 1.41e-11 | 7 |
dura mater | 3.74e-10 | 1 |
future meninx | 3.74e-10 | 1 |
ectomeninx | 3.74e-10 | 1 |
future dura mater | 3.74e-10 | 1 |
extraembryonic membrane | 7.33e-10 | 14 |
membranous layer | 7.33e-10 | 14 |
dermis | 6.68e-09 | 9 |
dermatome | 6.68e-09 | 9 |
future dermis | 6.68e-09 | 9 |
brain vasculature | 1.72e-07 | 5 |
vasculature of organ | 3.38e-07 | 11 |
organ component layer | 4.82e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.31e-10 | 1 |
endocrine pancreas cancer | 6.31e-10 | 1 |
pancreatic endocrine carcinoma | 6.31e-10 | 1 |