FFCP PHASE1:Hg19::chr1:155294116..155294127,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23623 | |EntrezGene=23623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17153 | |HGNC=17153 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000489860_5end | |association_with_transcript=47bp_to_ENST00000489860_5end | ||
|cluster_id=chr1:155294116..155294127,+ | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_20_at_RUSC1_5end | |description=CAGE_peak_20_at_RUSC1_5end | ||
|id=chr1:155294116..155294127,+ | |id=chr1:155294116..155294127,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002595;6.78e-08;5!CL:0002552;6.78e-08;5!CL:0002569;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,6.55e-08,5;CL:0002595,7.49e-08,5;CL:0002569,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;6.78e-08;5!UBERON:0001533;6.78e-08;5!UBERON:0003422;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,7.49e-08,5;UBERON:0001533,7.49e-08,5;UBERON:0003422,8.97e-07,6 | |||
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| ||
|short_description=p20@RUSC1 | |short_description=p20@RUSC1 | ||
}} | }} |
Latest revision as of 12:39, 17 September 2015
Short description: | p20@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_RUSC1_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | 47bp_to_ENST00000489860_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 6.55e-08 | 5 |
smooth muscle cell of the subclavian artery | 7.49e-08 | 5 |
mesenchymal stem cell of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 7.49e-08 | 5 |
subclavian artery | 7.49e-08 | 5 |
mesenchyme of umbilical cord | 8.97e-07 | 6 |