FFCP PHASE1:Hg19::chr1:158326841..158326852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:158326841..158326852,+ | |||
|coexpression_cluster_id=C419 | |||
|description=CAGE_peak_at_chr1:158326841..158326852,+ | |description=CAGE_peak_at_chr1:158326841..158326852,+ | ||
|id=chr1:158326841..158326852,+ | |id=chr1:158326841..158326852,+ | ||
|ontology_enrichment_celltype=CL:0000840!2.15e-21!5;CL:0001029!2.15e-21!5;CL:0000990!2.45e-14!8;CL:0000451!9.24e-12!10;CL:0000946!1.07e-08!1;CL:0000786!1.07e-08!1;CL:0000980!1.07e-08!1;CL:0000557!2.67e-07!71;CL:0002274!5.31e-07!5;CL:0000457!5.31e-07!5;CL:0002191!5.31e-07!5;CL:0000097!5.31e-07!5;CL:0000831!5.31e-07!5;CL:0002028!5.31e-07!5;CL:0000738!6.36e-07!140;CL:0002031!8.75e-07!124 | |ontology_enrichment_celltype=CL:0000840!2.15e-21!5;CL:0001029!2.15e-21!5;CL:0000990!2.45e-14!8;CL:0000451!9.24e-12!10;CL:0000946!1.07e-08!1;CL:0000786!1.07e-08!1;CL:0000980!1.07e-08!1;CL:0000557!2.67e-07!71;CL:0002274!5.31e-07!5;CL:0000457!5.31e-07!5;CL:0002191!5.31e-07!5;CL:0000097!5.31e-07!5;CL:0000831!5.31e-07!5;CL:0002028!5.31e-07!5;CL:0000738!6.36e-07!140;CL:0002031!8.75e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000840;8.63e-43;5!CL:0000990;7.50e-29;8!CL:0000451;9.02e-24;10!CL:0002567;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,9.96e-43,5;CL:0001029,9.96e-43,5;CL:0000990,8.25e-29,8;CL:0000451,9.75e-24,10;CL:0002567,1.09e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.87e-10!102;UBERON:0003061!2.87e-10!102;UBERON:0000989!2.82e-09!1;UBERON:0008811!2.82e-09!1;UBERON:0006258!2.82e-09!1;UBERON:0005876!2.82e-09!1;UBERON:0004874!2.82e-09!1;UBERON:0002171!3.31e-09!1;UBERON:0006518!3.31e-09!1;UBERON:0008949!3.31e-09!1;UBERON:0000101!3.31e-09!1;UBERON:0002167!3.31e-09!1;UBERON:0002193!3.73e-09!112;UBERON:0002370!7.29e-09!4;UBERON:0005058!7.29e-09!4;UBERON:0009113!7.29e-09!4;UBERON:0003295!7.29e-09!4;UBERON:0005562!7.29e-09!4;UBERON:0000974!1.47e-07!10;UBERON:0009722!6.92e-07!11;UBERON:0007690!6.92e-07!11 | |ontology_enrichment_uberon=UBERON:0002390!2.87e-10!102;UBERON:0003061!2.87e-10!102;UBERON:0000989!2.82e-09!1;UBERON:0008811!2.82e-09!1;UBERON:0006258!2.82e-09!1;UBERON:0005876!2.82e-09!1;UBERON:0004874!2.82e-09!1;UBERON:0002171!3.31e-09!1;UBERON:0006518!3.31e-09!1;UBERON:0008949!3.31e-09!1;UBERON:0000101!3.31e-09!1;UBERON:0002167!3.31e-09!1;UBERON:0002193!3.73e-09!112;UBERON:0002370!7.29e-09!4;UBERON:0005058!7.29e-09!4;UBERON:0009113!7.29e-09!4;UBERON:0003295!7.29e-09!4;UBERON:0005562!7.29e-09!4;UBERON:0000974!1.47e-07!10;UBERON:0009722!6.92e-07!11;UBERON:0007690!6.92e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.37e-15;2!UBERON:0005058;2.37e-15;2!UBERON:0009113;2.37e-15;2!UBERON:0004177;6.39e-07;5!UBERON:0005057;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.26e-08,4;UBERON:0005058,2.26e-08,4;UBERON:0009113,2.26e-08,4;UBERON:0003295,2.26e-08,4;UBERON:0005562,2.26e-08,4 | |||
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|short_description=p@chr1:158326841..158326852,+ | |short_description=p@chr1:158326841..158326852,+ | ||
}} | }} |
Latest revision as of 22:57, 27 July 2015
Short description: | p@chr1:158326841..158326852, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:158326841..158326852, + |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 9.96e-43 | 5 |
common dendritic progenitor | 9.96e-43 | 5 |
conventional dendritic cell | 8.25e-29 | 8 |
dendritic cell | 9.75e-24 | 10 |
light melanocyte | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.26e-08 | 4 |
hemolymphoid system gland | 2.26e-08 | 4 |
thymic region | 2.26e-08 | 4 |
pharyngeal gland | 2.26e-08 | 4 |
thymus primordium | 2.26e-08 | 4 |