FFCP PHASE1:Hg19::chr17:3817800..3817817,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:3817800..3817817,+
|short_description=p@chr17:3817800..3817817,+
|description=CAGE_peak_at_chr17:3817800..3817817,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:3817800..3817817,+ | |||
|coexpression_cluster_id=C448 | |||
|description=CAGE_peak_at_chr17:3817800..3817817,+ | |||
|id=chr17:3817800..3817817,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.86e-48!140;CL:0000037!2.06e-43!172;CL:0000566!2.06e-43!172;CL:0000988!3.37e-40!182;CL:0002032!2.31e-33!165;CL:0000837!2.31e-33!165;CL:0000766!1.79e-30!76;CL:0002087!2.71e-29!119;CL:0002031!1.88e-27!124;CL:0000236!4.27e-27!14;CL:0002057!1.12e-23!42;CL:0000094!3.23e-22!8;CL:0000763!5.52e-22!112;CL:0000049!5.52e-22!112;CL:0000860!1.07e-21!45;CL:0000945!1.80e-19!24;CL:0000826!1.80e-19!24;CL:0000557!8.57e-19!71;CL:0002393!1.68e-17!9;CL:0002397!1.68e-17!9;CL:0000839!2.00e-17!70;CL:0000081!1.05e-15!11;CL:0002194!3.89e-15!63;CL:0000576!3.89e-15!63;CL:0000040!3.89e-15!63;CL:0000559!3.89e-15!63;CL:0002009!1.70e-14!65;CL:0000134!4.53e-13!358;CL:0002320!1.54e-12!365;CL:0000838!1.04e-10!52;CL:0000219!1.13e-10!390;CL:0000542!1.99e-10!53;CL:0000051!1.99e-10!53;CL:0000034!3.35e-10!444;CL:0000775!8.90e-10!3;CL:0000784!1.02e-09!3;CL:0000048!4.53e-09!430;CL:0000767!5.93e-09!3;CL:0000842!7.34e-09!3;CL:0000723!9.54e-09!436;CL:0000771!6.87e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.72e-55;13!CL:0000094;2.12e-33;8!CL:0000945;2.37e-29;24!CL:0000081;3.47e-24;11!CL:0000775;8.81e-24;3!CL:0000784;1.11e-23;3!CL:0000771;6.06e-16;2!CL:0000542;1.88e-10;53!CL:0002032;9.73e-09;1!CL:0000037;9.73e-09;1!CL:0001024;9.73e-09;1!CL:0000557;9.73e-09;1!CL:0000451;8.04e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.73e-51,14;CL:0000094,1.95e-33,8;CL:0000945,2.16e-29,24;CL:0000826,2.16e-29,24;CL:0000081,3.27e-24,11;CL:0000775,8.49e-24,3;CL:0000784,1.24e-23,3;CL:0000738,1.93e-22,136;CL:0000037,2.61e-21,168;CL:0000988,5.03e-20,177;CL:0000771,5.41e-16,2;CL:0002032,1.14e-14,161;CL:0000837,1.14e-14,161;CL:0000838,1.08e-12,52;CL:0000542,2.01e-12,53;CL:0000051,2.01e-12,53;CL:0001024,1.22e-08,1;CL:0002087,2.02e-08,115;CL:0002031,5.91e-08,120;CL:0000134,6.38e-08,354;CL:0002320,1.10e-07,361;CL:0000034,4.43e-07,441;CL:0000766,7.08e-07,72;CL:0000219,7.61e-07,386;CL:0000451,8.28e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;1.88e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.75e-21!102;UBERON:0003061!2.75e-21!102;UBERON:0002193!7.05e-20!112;UBERON:0002371!1.88e-17!80;UBERON:0001474!9.81e-16!86;UBERON:0002405!5.74e-14!115;UBERON:0004765!2.36e-12!101;UBERON:0001434!2.36e-12!101;UBERON:0002384!8.16e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.33e-07,371 | |||
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| ||
|short_description=p@chr17:3817800..3817817,+ | |||
}} | }} |
Latest revision as of 16:17, 25 July 2015
Short description: | p@chr17:3817800..3817817, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:3817800..3817817, + |
Coexpression cluster: | C448_Eosinophils_CD19_Neutrophils_immature_CD14_CD34_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.73e-51 | 14 |
granulocyte | 1.95e-33 | 8 |
lymphocyte of B lineage | 2.16e-29 | 24 |
pro-B cell | 2.16e-29 | 24 |
blood cell | 3.27e-24 | 11 |
neutrophil | 8.49e-24 | 3 |
plasmacytoid dendritic cell | 1.24e-23 | 3 |
leukocyte | 1.93e-22 | 136 |
hematopoietic stem cell | 2.61e-21 | 168 |
hematopoietic cell | 5.03e-20 | 177 |
eosinophil | 5.41e-16 | 2 |
hematopoietic oligopotent progenitor cell | 1.14e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-14 | 161 |
lymphoid lineage restricted progenitor cell | 1.08e-12 | 52 |
lymphocyte | 2.01e-12 | 53 |
common lymphoid progenitor | 2.01e-12 | 53 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.22e-08 | 1 |
nongranular leukocyte | 2.02e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-08 | 120 |
mesenchymal cell | 6.38e-08 | 354 |
connective tissue cell | 1.10e-07 | 361 |
stem cell | 4.43e-07 | 441 |
myeloid leukocyte | 7.08e-07 | 72 |
motile cell | 7.61e-07 | 386 |
dendritic cell | 8.28e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.33e-07 | 371 |