FFCP PHASE1:Hg19::chr21:39493435..39493461,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10281 | |EntrezGene=10281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3045 | |HGNC=3045 | ||
|TSSclassifier=strong | |||
|UniProt=P56555 | |UniProt=P56555 | ||
|association_with_transcript=0bp_to_ENST00000328264,NM_005867,uc002ywp.2_5end | |association_with_transcript=0bp_to_ENST00000328264,NM_005867,uc002ywp.2_5end | ||
|cluster_id=chr21:39493435..39493461,- | |||
|coexpression_cluster_id=C2631 | |||
|description=CAGE_peak_1_at_DSCR4_5end | |description=CAGE_peak_1_at_DSCR4_5end | ||
|id=chr21:39493435..39493461,- | |id=chr21:39493435..39493461,- | ||
|ontology_enrichment_celltype=CL:0000039!3.19e-09!7;CL:0000586!3.19e-09!7;CL:0002541!3.78e-08!3;CL:0000064!1.38e-07!3;CL:0005012!1.38e-07!3;CL:0000067!1.38e-07!3;CL:0002304!1.38e-07!3 | |ontology_enrichment_celltype=CL:0000039!3.19e-09!7;CL:0000586!3.19e-09!7;CL:0002541!3.78e-08!3;CL:0000064!1.38e-07!3;CL:0005012!1.38e-07!3;CL:0000067!1.38e-07!3;CL:0002304!1.38e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.20e-14;7!CL:0000586;5.20e-14;7!CL:0002541;6.41e-12;3!CL:0000064;4.85e-11;3!CL:0000067;4.85e-11;3!CL:0005012;4.85e-11;3!CL:0002304;4.85e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.42e-14,7;CL:0000586,5.42e-14,7;CL:0002541,6.66e-12,3;CL:0000064,5.03e-11,3;CL:0000067,5.03e-11,3;CL:0005012,5.03e-11,3;CL:0002304,5.03e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!6.58e-08!8;DOID:3095!1.54e-07!22;DOID:2994!1.54e-07!22 | |ontology_enrichment_disease=DOID:1036!6.58e-08!8;DOID:3095!1.54e-07!22;DOID:2994!1.54e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.68e-08;8!DOID:3095;6.10e-08;22!DOID:2994;6.10e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.20e-10,235;DOID:14566,1.43e-09,239;DOID:0050687,1.26e-08,143;DOID:1036,1.69e-08,8;DOID:3095,6.20e-08,22;DOID:2994,6.20e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001032!7.18e-13!24;UBERON:0004456!7.18e-13!24;UBERON:0007625!5.03e-12!11;UBERON:0000020!1.93e-11!23;UBERON:0002104!9.67e-11!21;UBERON:0000488!1.45e-09!4;UBERON:0000970!2.36e-09!20;UBERON:0000476!3.78e-08!3;UBERON:0000920!3.78e-08!3;UBERON:0000019!4.78e-08!19;UBERON:0000047!4.78e-08!19;UBERON:0004088!4.78e-08!19;UBERON:0003072!4.78e-08!19;UBERON:0003071!4.78e-08!19;UBERON:0004128!4.78e-08!19;UBERON:0001778!1.38e-07!3;UBERON:0001775!1.38e-07!3;UBERON:0001456!4.04e-07!21 | |ontology_enrichment_uberon=UBERON:0001032!7.18e-13!24;UBERON:0004456!7.18e-13!24;UBERON:0007625!5.03e-12!11;UBERON:0000020!1.93e-11!23;UBERON:0002104!9.67e-11!21;UBERON:0000488!1.45e-09!4;UBERON:0000970!2.36e-09!20;UBERON:0000476!3.78e-08!3;UBERON:0000920!3.78e-08!3;UBERON:0000019!4.78e-08!19;UBERON:0000047!4.78e-08!19;UBERON:0004088!4.78e-08!19;UBERON:0003072!4.78e-08!19;UBERON:0003071!4.78e-08!19;UBERON:0004128!4.78e-08!19;UBERON:0001778!1.38e-07!3;UBERON:0001775!1.38e-07!3;UBERON:0001456!4.04e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.09e-14;4!UBERON:0003124;6.41e-12;3!UBERON:0000920;6.41e-12;3!UBERON:0001778;4.85e-11;3!UBERON:0001775;4.85e-11;3!UBERON:0002203;1.86e-09;6!UBERON:0001768;1.86e-09;6!UBERON:0002200;1.86e-09;6!UBERON:0001905;2.09e-09;2!UBERON:0002757;2.09e-09;2!UBERON:0010134;2.09e-09;2!UBERON:0005408;2.09e-09;2!UBERON:0001899;2.09e-09;2!UBERON:0007625;1.08e-07;11!UBERON:0000473;1.35e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,4.02e-14,4;UBERON:0000920,6.66e-12,3;UBERON:0001778,5.03e-11,3;UBERON:0001775,5.03e-11,3;UBERON:0002203,1.84e-09,6;UBERON:0001768,1.84e-09,6;UBERON:0002200,1.84e-09,6;UBERON:0001905,2.09e-09,2;UBERON:0002757,2.09e-09,2;UBERON:0010134,2.09e-09,2;UBERON:0005408,2.09e-09,2;UBERON:0001899,2.09e-09,2;UBERON:0003124,6.83e-09,7;UBERON:0007625,1.03e-07,11;UBERON:0000473,1.35e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,2.66075276955077,1.14185221401064,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71567810298526,0,0,0,0,0,0,0,0.927443239800615,1.87853910777315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59259437334337,0,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,11.0253882463063,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0148246908832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2321716629757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2385605212763,0,0.270455678475983,0,0,0,0,19.2963229581726,21.2856863969984,0,5.25237866422918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1540967778128,0,0,0,2.95162491386597,0,0,0,0,0,0,0,0,0,34.0686746982534,18.9062401598209,33.1205707872059,28.9002009312541,14.9930545074002,2.47313502185028,22.9204953688013,0,0,0,54.3685542087405,54.3093220060139,57.8984475066657,32.6376420285598,0,0,25.6275508809862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67672456501295,6.24036028559124,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,14.9035958777242,0,0,33.346069224638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,5.21235620992578,0,0,0.387848869084652,0,0,0,0,0,0,0,9.48535833110133,0,0,0,0,0,0,22.144627571283,0,0,0,0,0.221858103073705,0.372578417648301,0,0,0.909894705249887,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33866436948529,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,15.9347004275781,0,27.2382962260679,0,0,0,0,0,0,0,0,0,0,0,41.2490413626281,62.2124886104824,0,0,23.328723352774,0,0,0,0,0,0,0,0,0,0,0,0,0.78624198594322,0,0,16.6903941410476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11356390343545,0,17.5904826792687,0,0,0,0,0,0,0,0,0,0,0,0,7.5955278502946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7036257217984,51.312892909632,9.4849611660043,0,0,31.5891499508393,2.80381183407486,2.67964130156179,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0.202117188958219,0.653150243690884,0.342233301085281,0.134704106029175,0,0,0,16.5427386110459,0,0,0,0,0,0,0,0 | ||
|short_description=p1@DSCR4 | |short_description=p1@DSCR4 | ||
}} | }} |
Latest revision as of 09:23, 18 September 2015
Short description: | p1@DSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DSCR4_5end |
Coexpression cluster: | C2631_chronic_pineal_gall_teratocarcinoma_testicular_choriocarcinoma_cholangiocellular |
Association with transcript: | 0bp_to_ENST00000328264, NM_005867, uc002ywp.2_5end |
EntrezGene: | DSCR4 |
HGNC: | 3045 |
UniProt: | P56555 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.42e-14 | 7 |
germ cell | 5.42e-14 | 7 |
chorionic membrane mesenchymal stem cell | 6.66e-12 | 3 |
ciliated cell | 5.03e-11 | 3 |
ciliated epithelial cell | 5.03e-11 | 3 |
multi-ciliated epithelial cell | 5.03e-11 | 3 |
non-pigmented ciliary epithelial cell | 5.03e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 4.02e-14 | 4 |
egg chorion | 6.66e-12 | 3 |
ciliary epithelium | 5.03e-11 | 3 |
ciliary body | 5.03e-11 | 3 |
vasculature of eye | 1.84e-09 | 6 |
uvea | 1.84e-09 | 6 |
vasculature of head | 1.84e-09 | 6 |
pineal body | 2.09e-09 | 2 |
regional part of epithalamus | 2.09e-09 | 2 |
secretory circumventricular organ | 2.09e-09 | 2 |
circumventricular organ | 2.09e-09 | 2 |
epithalamus | 2.09e-09 | 2 |
chorion | 6.83e-09 | 7 |
pigment epithelium of eye | 1.03e-07 | 11 |
testis | 1.35e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.20e-10 | 235 |
disease of cellular proliferation | 1.43e-09 | 239 |
cell type cancer | 1.26e-08 | 143 |
chronic leukemia | 1.69e-08 | 8 |
germ cell and embryonal cancer | 6.20e-08 | 22 |
germ cell cancer | 6.20e-08 | 22 |