FFCP PHASE1:Hg19::chr3:147109858..147109861,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:147109858..147109861,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr3:147109858..147109861,+ | |description=CAGE_peak_at_chr3:147109858..147109861,+ | ||
|id=chr3:147109858..147109861,+ | |id=chr3:147109858..147109861,+ | ||
|ontology_enrichment_celltype=CL:0000708!6.18e-18!3;CL:0002575!8.15e-13!2;CL:0002549!2.02e-12!2;CL:0002602!5.23e-12!2;CL:0000346!1.01e-08!3;CL:1000428!1.01e-08!3;CL:0002559!9.81e-07!4 | |ontology_enrichment_celltype=CL:0000708!6.18e-18!3;CL:0002575!8.15e-13!2;CL:0002549!2.02e-12!2;CL:0002602!5.23e-12!2;CL:0000346!1.01e-08!3;CL:1000428!1.01e-08!3;CL:0002559!9.81e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.51e-57;2!CL:0000346;3.19e-38;3!CL:1000428;3.19e-38;3!CL:0000669;2.06e-29;4!CL:0002559;2.02e-23;5!CL:0002549;2.21e-15;2!CL:0000708;7.42e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.13e-57,2;CL:0000346,2.18e-38,3;CL:1000428,2.18e-38,3;CL:0000669,1.78e-29,4;CL:0002559,1.61e-23,5;CL:0002549,2.74e-15,2;CL:0000708,8.17e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.04e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr3:147109858..147109861,+ | |short_description=p@chr3:147109858..147109861,+ | ||
}} | }} |
Latest revision as of 16:42, 29 July 2015
Short description: | p@chr3:147109858..147109861, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147109858..147109861, + |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.13e-57 | 2 |
hair follicle dermal papilla cell | 2.18e-38 | 3 |
stem cell of epidermis | 2.18e-38 | 3 |
pericyte cell | 1.78e-29 | 4 |
hair follicle cell | 1.61e-23 | 5 |
fibroblast of choroid plexus | 2.74e-15 | 2 |
leptomeningeal cell | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.18e-38 | 3 |
papillary layer of dermis | 2.18e-38 | 3 |
hair follicle | 1.61e-23 | 5 |
hair follicle placode | 1.61e-23 | 5 |
vascular plexus | 2.74e-15 | 2 |
ventricle of nervous system | 2.74e-15 | 2 |
choroid plexus | 2.74e-15 | 2 |
brain ventricle | 2.74e-15 | 2 |
ventricular system of brain | 2.74e-15 | 2 |
ventricular system of central nervous system | 2.74e-15 | 2 |
dermis | 1.49e-13 | 9 |
dermatome | 1.49e-13 | 9 |
future dermis | 1.49e-13 | 9 |
blood-cerebrospinal fluid barrier | 8.17e-11 | 3 |
skin epidermis | 1.59e-08 | 15 |
outer epithelium | 1.59e-08 | 15 |
enveloping layer of ectoderm | 1.59e-08 | 15 |
brain vasculature | 6.77e-07 | 5 |