FFCP PHASE1:Hg19::chr10:104403716..104403727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104403716..104403727,+ | |||
|description=CAGE_peak_at_chr10:104403716..104403727,+ | |description=CAGE_peak_at_chr10:104403716..104403727,+ | ||
|id=chr10:104403716..104403727,+ | |id=chr10:104403716..104403727,+ | ||
|ontology_enrichment_celltype=CL:0000222!8.31e-07!119 | |ontology_enrichment_celltype=CL:0000222!8.31e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.72e-07,32;CL:0000222,5.75e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.56e-11!241;UBERON:0003914!5.40e-11!118;UBERON:0000025!3.23e-10!194;UBERON:0000055!7.73e-10!69;UBERON:0000477!1.05e-09!286;UBERON:0001981!1.11e-09!60;UBERON:0007500!1.11e-09!60;UBERON:0004537!1.11e-09!60;UBERON:0006965!1.11e-09!60;UBERON:0004872!1.72e-09!84;UBERON:0002049!6.26e-09!79;UBERON:0007798!6.26e-09!79;UBERON:0000468!6.44e-09!659;UBERON:0001009!9.60e-09!113;UBERON:0004535!1.33e-08!110;UBERON:0003081!2.41e-08!216;UBERON:0000926!2.80e-08!448;UBERON:0004120!2.80e-08!448;UBERON:0006603!2.80e-08!448;UBERON:0001637!8.43e-08!42;UBERON:0003509!8.43e-08!42;UBERON:0004572!8.43e-08!42;UBERON:0000480!1.02e-07!626;UBERON:0000467!1.17e-07!625 | |ontology_enrichment_uberon=UBERON:0004111!1.56e-11!241;UBERON:0003914!5.40e-11!118;UBERON:0000025!3.23e-10!194;UBERON:0000055!7.73e-10!69;UBERON:0000477!1.05e-09!286;UBERON:0001981!1.11e-09!60;UBERON:0007500!1.11e-09!60;UBERON:0004537!1.11e-09!60;UBERON:0006965!1.11e-09!60;UBERON:0004872!1.72e-09!84;UBERON:0002049!6.26e-09!79;UBERON:0007798!6.26e-09!79;UBERON:0000468!6.44e-09!659;UBERON:0001009!9.60e-09!113;UBERON:0004535!1.33e-08!110;UBERON:0003081!2.41e-08!216;UBERON:0000926!2.80e-08!448;UBERON:0004120!2.80e-08!448;UBERON:0006603!2.80e-08!448;UBERON:0001637!8.43e-08!42;UBERON:0003509!8.43e-08!42;UBERON:0004572!8.43e-08!42;UBERON:0000480!1.02e-07!626;UBERON:0000467!1.17e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.67e-08;42!UBERON:0003509;1.67e-08;42!UBERON:0004572;1.67e-08;42!UBERON:0004573;2.88e-07;33!UBERON:0004571;2.88e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,1.64e-15,59;UBERON:0001981,1.64e-15,59;UBERON:0004537,1.64e-15,59;UBERON:0006965,1.64e-15,59;UBERON:0000055,2.99e-13,68;UBERON:0004872,4.11e-13,83;UBERON:0001637,2.24e-11,42;UBERON:0003509,2.24e-11,42;UBERON:0004572,2.24e-11,42;UBERON:0002049,2.86e-11,78;UBERON:0007798,2.86e-11,78;UBERON:0003081,7.04e-11,203;UBERON:0001009,1.75e-10,112;UBERON:0000926,1.84e-10,315;UBERON:0004120,1.84e-10,315;UBERON:0006603,1.84e-10,315;UBERON:0003914,2.61e-10,117;UBERON:0004535,3.37e-10,109;UBERON:0000025,2.02e-08,192;UBERON:0004111,8.11e-08,240;UBERON:0004573,1.05e-07,33;UBERON:0004571,1.05e-07,33;UBERON:0007503,3.68e-07,78 | |||
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| ||
|short_description=p@chr10:104403716..104403727,+ | |short_description=p@chr10:104403716..104403727,+ | ||
}} | }} |
Latest revision as of 09:51, 23 July 2015
Short description: | p@chr10:104403716..104403727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104403716..104403727, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.72e-07 | 32 |
mesodermal cell | 5.75e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 1.64e-15 | 59 |
blood vessel | 1.64e-15 | 59 |
blood vasculature | 1.64e-15 | 59 |
vascular cord | 1.64e-15 | 59 |
vessel | 2.99e-13 | 68 |
splanchnic layer of lateral plate mesoderm | 4.11e-13 | 83 |
artery | 2.24e-11 | 42 |
arterial blood vessel | 2.24e-11 | 42 |
arterial system | 2.24e-11 | 42 |
vasculature | 2.86e-11 | 78 |
vascular system | 2.86e-11 | 78 |
lateral plate mesoderm | 7.04e-11 | 203 |
circulatory system | 1.75e-10 | 112 |
mesoderm | 1.84e-10 | 315 |
mesoderm-derived structure | 1.84e-10 | 315 |
presumptive mesoderm | 1.84e-10 | 315 |
epithelial tube | 2.61e-10 | 117 |
cardiovascular system | 3.37e-10 | 109 |
tube | 2.02e-08 | 192 |
anatomical conduit | 8.11e-08 | 240 |
systemic artery | 1.05e-07 | 33 |
systemic arterial system | 1.05e-07 | 33 |
epithelial vesicle | 3.68e-07 | 78 |