FFCP PHASE1:Hg19::chr13:38158993..38159017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38158993..38159017,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38158993..38159017,- | |description=CAGE_peak_at_chr13:38158993..38159017,- | ||
|id=chr13:38158993..38159017,- | |id=chr13:38158993..38159017,- | ||
|ontology_enrichment_celltype=CL:0000055!1.18e-22!180;CL:0000057!1.13e-15!75;CL:0000680!1.02e-13!57;CL:0000056!1.02e-13!57;CL:0000355!1.02e-13!57;CL:0000048!3.20e-12!430;CL:0000723!5.14e-12!436;CL:0002334!7.71e-12!12;CL:0000187!8.42e-12!54;CL:0000034!3.47e-11!444;CL:0000183!5.05e-10!59;CL:0000393!1.04e-09!60;CL:0000211!1.04e-09!60;CL:0002494!2.70e-08!16;CL:0000222!7.42e-08!119 | |ontology_enrichment_celltype=CL:0000055!1.18e-22!180;CL:0000057!1.13e-15!75;CL:0000680!1.02e-13!57;CL:0000056!1.02e-13!57;CL:0000355!1.02e-13!57;CL:0000048!3.20e-12!430;CL:0000723!5.14e-12!436;CL:0002334!7.71e-12!12;CL:0000187!8.42e-12!54;CL:0000034!3.47e-11!444;CL:0000183!5.05e-10!59;CL:0000393!1.04e-09!60;CL:0000211!1.04e-09!60;CL:0002494!2.70e-08!16;CL:0000222!7.42e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.23e-18;12!CL:0002548;4.18e-10;6!CL:1000306;5.89e-10;4!CL:0002547;5.89e-10;4!CL:0002580;2.47e-08;3!CL:0002595;4.80e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.85e-18,12;CL:0000057,3.60e-14,76;CL:0002548,4.72e-10,6;CL:1000306,7.76e-10,4;CL:0002547,7.76e-10,4;CL:0002580,2.31e-08,3;CL:0000048,1.19e-07,427;CL:0000723,2.44e-07,433;CL:0002595,5.92e-07,5;CL:0000034,6.10e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.55e-12!14 | |ontology_enrichment_disease=DOID:2394!2.55e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.74e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.20e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.33e-13!61;UBERON:0002036!3.33e-13!61;UBERON:0003082!3.33e-13!61;UBERON:0002385!1.91e-12!63;UBERON:0001015!1.91e-12!63;UBERON:0000383!1.91e-12!63;UBERON:0000914!6.90e-12!83;UBERON:0002329!6.90e-12!83;UBERON:0003077!6.90e-12!83;UBERON:0003059!6.90e-12!83;UBERON:0007282!6.90e-12!83;UBERON:0009618!6.90e-12!83;UBERON:0007285!6.90e-12!83;UBERON:0004290!8.72e-12!70;UBERON:0001637!3.15e-10!42;UBERON:0003509!3.15e-10!42;UBERON:0004572!3.15e-10!42;UBERON:0004872!1.36e-09!84;UBERON:0000486!3.50e-09!82;UBERON:0004573!6.40e-08!33;UBERON:0004571!6.40e-08!33;UBERON:0000948!2.06e-07!24;UBERON:0005498!2.06e-07!24;UBERON:0004140!2.06e-07!24;UBERON:0009881!2.06e-07!24;UBERON:0004141!2.06e-07!24;UBERON:0003084!2.06e-07!24;UBERON:0007005!2.06e-07!24;UBERON:0004139!2.06e-07!24;UBERON:0004291!2.06e-07!24;UBERON:0000490!6.60e-07!138 | |ontology_enrichment_uberon=UBERON:0001134!3.33e-13!61;UBERON:0002036!3.33e-13!61;UBERON:0003082!3.33e-13!61;UBERON:0002385!1.91e-12!63;UBERON:0001015!1.91e-12!63;UBERON:0000383!1.91e-12!63;UBERON:0000914!6.90e-12!83;UBERON:0002329!6.90e-12!83;UBERON:0003077!6.90e-12!83;UBERON:0003059!6.90e-12!83;UBERON:0007282!6.90e-12!83;UBERON:0009618!6.90e-12!83;UBERON:0007285!6.90e-12!83;UBERON:0004290!8.72e-12!70;UBERON:0001637!3.15e-10!42;UBERON:0003509!3.15e-10!42;UBERON:0004572!3.15e-10!42;UBERON:0004872!1.36e-09!84;UBERON:0000486!3.50e-09!82;UBERON:0004573!6.40e-08!33;UBERON:0004571!6.40e-08!33;UBERON:0000948!2.06e-07!24;UBERON:0005498!2.06e-07!24;UBERON:0004140!2.06e-07!24;UBERON:0009881!2.06e-07!24;UBERON:0004141!2.06e-07!24;UBERON:0003084!2.06e-07!24;UBERON:0007005!2.06e-07!24;UBERON:0004139!2.06e-07!24;UBERON:0004291!2.06e-07!24;UBERON:0000490!6.60e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.89e-10;4!UBERON:0000415;5.89e-10;4!UBERON:0007240;5.89e-10;4!UBERON:0005742;5.89e-10;4!UBERON:0005734;5.89e-10;4!UBERON:0004664;5.89e-10;4!UBERON:0004663;5.89e-10;4!UBERON:0003834;4.80e-07;5!UBERON:0001533;4.80e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.76e-10,4;UBERON:0007240,7.76e-10,4;UBERON:0005742,7.76e-10,4;UBERON:0005734,7.76e-10,4;UBERON:0004664,7.76e-10,4;UBERON:0004663,7.76e-10,4;UBERON:0003834,5.92e-07,5;UBERON:0001533,5.92e-07,5 | |||
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| ||
|short_description=p@chr13:38158993..38159017,- | |short_description=p@chr13:38158993..38159017,- | ||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38158993..38159017, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38158993..38159017, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.85e-18 | 12 |
fibroblast | 3.60e-14 | 76 |
cardiac fibroblast | 4.72e-10 | 6 |
fibroblast of tunica adventitia of artery | 7.76e-10 | 4 |
fibroblast of the aortic adventitia | 7.76e-10 | 4 |
preadipocyte of the breast | 2.31e-08 | 3 |
multi fate stem cell | 1.19e-07 | 427 |
somatic stem cell | 2.44e-07 | 433 |
smooth muscle cell of the subclavian artery | 5.92e-07 | 5 |
stem cell | 6.10e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.76e-10 | 4 |
tunica adventitia of artery | 7.76e-10 | 4 |
adventitia | 7.76e-10 | 4 |
tunica adventitia of blood vessel | 7.76e-10 | 4 |
aorta tunica adventitia | 7.76e-10 | 4 |
aorta wall | 7.76e-10 | 4 |
thoracic segment blood vessel | 5.92e-07 | 5 |
subclavian artery | 5.92e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.20e-09 | 14 |