FFCP PHASE1:Hg19::chr16:89580747..89580750,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:89580747..89580750,+ | |||
|description=CAGE_peak_at_chr16:89580747..89580750,+ | |description=CAGE_peak_at_chr16:89580747..89580750,+ | ||
|id=chr16:89580747..89580750,+ | |id=chr16:89580747..89580750,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.93e-23;1!DOID:3149;2.93e-23;1!DOID:3451;2.45e-12;2!DOID:4159;2.45e-12;2!DOID:0060122;2.45e-12;2!DOID:3910;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.13e-23,1;DOID:3149,5.13e-23,1;DOID:3910,2.32e-12,2;DOID:3451,3.24e-12,2;DOID:4159,3.24e-12,2;DOID:0060122,3.24e-12,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.45e-12;2!UBERON:0002173;2.45e-12;2!UBERON:0002186;2.45e-12;2!UBERON:0004821;1.17e-08;3!UBERON:0007499;1.17e-08;3!UBERON:0003215;1.17e-08;3!UBERON:0010368;1.17e-08;3!UBERON:0009911;1.17e-08;3!UBERON:0002299;1.17e-08;3!UBERON:0006524;1.17e-08;3!UBERON:0008874;1.17e-08;3!UBERON:0002169;1.17e-08;3!UBERON:0004894;1.17e-08;3!UBERON:0000014;8.37e-07;4!UBERON:0002346;8.37e-07;4!UBERON:0000923;8.37e-07;4!UBERON:0010316;8.37e-07;4!UBERON:0005291;8.37e-07;4!UBERON:0009856;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0000014,9.63e-07,4 | |||
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| ||
|short_description=p@chr16:89580747..89580750,+ | |short_description=p@chr16:89580747..89580750,+ | ||
}} | }} |
Latest revision as of 13:27, 25 July 2015
Short description: | p@chr16:89580747..89580750, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:89580747..89580750, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
zone of skin | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.13e-23 | 1 |
keratoacanthoma | 5.13e-23 | 1 |
lung adenocarcinoma | 2.32e-12 | 2 |
skin carcinoma | 3.24e-12 | 2 |
skin cancer | 3.24e-12 | 2 |
integumentary system cancer | 3.24e-12 | 2 |