FFCP PHASE1:Hg19::chr17:52978107..52978118,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:52978107..52978118,+
|short_description=p3@TOM1L1
|description=CAGE_peak_3_at_TOM1L1_5end
|association_with_transcript=55bp_to_ENST00000445275,NM_005486,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10040 | |EntrezGene=10040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11983 | |HGNC=11983 | ||
|TSSclassifier=strong | |||
|UniProt=O75674,Q8N749 | |UniProt=O75674,Q8N749 | ||
|association_with_transcript=55bp_to_ENST00000445275,NM_005486,uc002iub.2,uc002iuc.2,uc002iud.2,uc010dbz.2,uc010dca.1,uc010wnb.1,uc010wnc.1,uc010wnd.1_5end | |||
|cluster_id=chr17:52978107..52978118,+ | |||
|description=CAGE_peak_3_at_TOM1L1_5end | |||
|id=chr17:52978107..52978118,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.70e-19!254;CL:0000223!3.30e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000312;2.61e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.24e-10,253;CL:0000312,2.24e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.47e-08;30 | |||
|ontology_enrichment_disease=DOID:0050687!1.53e-31!143;DOID:305!3.58e-31!106;DOID:162!3.77e-21!235;DOID:14566!1.19e-19!239;DOID:299!1.31e-07!25;DOID:3119!9.50e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;7.35e-08;14!DOID:4362;5.58e-07;5!DOID:305;6.12e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.56e-17,106;DOID:0050687,6.30e-12,143;DOID:3119,1.10e-07,14;DOID:162,4.95e-07,235;DOID:4362,5.65e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.33e-15!86;UBERON:0001017!2.76e-14!82;UBERON:0000073!4.34e-14!94;UBERON:0001016!4.34e-14!94;UBERON:0000955!1.14e-13!69;UBERON:0006238!1.14e-13!69;UBERON:0002346!2.52e-13!90;UBERON:0003075!7.02e-13!86;UBERON:0007284!7.02e-13!86;UBERON:0000924!1.00e-12!173;UBERON:0006601!1.00e-12!173;UBERON:0004121!2.99e-12!169;UBERON:0001049!3.63e-12!57;UBERON:0005068!3.63e-12!57;UBERON:0006241!3.63e-12!57;UBERON:0007135!3.63e-12!57;UBERON:0007023!4.80e-12!115;UBERON:0000033!5.61e-12!123;UBERON:0000153!1.17e-11!129;UBERON:0007811!1.17e-11!129;UBERON:0002616!1.32e-11!59;UBERON:0003056!4.56e-11!61;UBERON:0000062!1.55e-10!511;UBERON:0000475!2.10e-10!365;UBERON:0003080!4.13e-10!42;UBERON:0000481!6.86e-10!347;UBERON:0002780!1.41e-09!41;UBERON:0001890!1.41e-09!41;UBERON:0006240!1.41e-09!41;UBERON:0001869!6.31e-09!32;UBERON:0002020!1.10e-08!34;UBERON:0003528!1.10e-08!34;UBERON:0001007!1.56e-08!155;UBERON:0001555!1.56e-08!155;UBERON:0007026!1.56e-08!155;UBERON:0001893!1.81e-08!34;UBERON:0000956!2.16e-08!25;UBERON:0000203!2.16e-08!25;UBERON:0001950!3.46e-08!20;UBERON:0000064!3.95e-08!219;UBERON:0004921!4.65e-08!129;UBERON:0004185!4.65e-08!129;UBERON:0004119!4.78e-08!169;UBERON:0000925!4.78e-08!169;UBERON:0006595!4.78e-08!169;UBERON:0002791!5.59e-08!33;UBERON:0002619!8.17e-08!22;UBERON:0000922!1.73e-07!612;UBERON:0008947!3.06e-07!38;UBERON:0003258!3.06e-07!38;UBERON:0001041!3.17e-07!98;UBERON:0000065!7.41e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001870;8.52e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.70e-09,223;UBERON:0010371,3.17e-08,104;UBERON:0001870,8.41e-07,3;UBERON:0003056,9.16e-07,61 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.684372125364421,0.376627918784408,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,2.26883561193763,0.221729397462564,0.43917392846563,0.589405839739707,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0.516628905878827,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0.57978255948989,1.36373060295417,0,0.975789649036763,1.59035721985782,1.51052125730374,0.621966330092223,0.504641701751257,1.82488679537915,0,0,0,0,0,0.828147600278907,1.01150814046861,0.482022059766964,0.330881918197182,1.52515610864684,0.71181185733329,0.404493924480493,0.588664395376038,1.15424147083917,0,0,0,0,3.80265104465493,0,0,0,0.737930631258681,0.171567810298526,0.219500570817251,3.37205259772859,1.50793458617446,0.370353780634118,0,0,1.44331342025273,1.97081688457631,0,0,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0,0,0,0.16798212819886,0.850650583454319,0.716468181622786,1.16253575405585,0,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0.828728900423067,0,0,0,0.451199612907412,1.30926073077505,0,0,0.949964660035881,0,0,0,0,0,0.501689773854853,1.52925763827023,0,0.671624264166535,0,0,0.769350375349168,0,1.30151357865721,0.9273691048295,0.457847324091717,0.82509499920588,0,0.650060246036521,0,0,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.661139661443912,0.960950336825531,0.127612712494584,1.4162089319777,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0,0,0,0,0.48111056362756,0,1.08890984861323,0.753150406214233,0,0,0,0.459446800413919,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.99921590399346,0,1.12284324244932,0.146508179271894,0.36408156524854,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0.994147647766298,0.703347082052564,0,0,0.63337622438398,0.19924798825107,0,2.51932747854276,0.20453736500431,0.123084805461069,0.311039587661807,1.16828856491525,1.25314822272926,0,0,0,0,1.93866549219044,0.556608588971108,0,1.30213880542617,2.0990399999087,1.44999915086959,0.1137934482855,1.27126825146383,1.18193840883968,3.79217710565611,1.45802306691627,0.173624994933292,0,0.723578631752448,0,1.3269511191747,0.591095237907095,1.75508317723178,3.15921544205071,1.81250867562184,0.307801034015188,0.227884111694002,0.23056390438806,0,0,0,0.183195186803725,0,0,0,0.166211681900156,0.451191321234361,0,0.167821586975843,0.75901493089674,0.476809736941136,0.210998064528027,1.79556088975062,0.282706142867882,1.73110911793673,0,0.973033209536731,0,0,0,0,0.269604531922708,0,0.468528891450678,0,1.56531695145672,0.485560759068186,1.18375320854817,2.41981432097328,0.61214552326098,0.063186579628488,4.0587323241913,1.55532287095871,0,0,0.627865836814451,0,0.569219092059585,0.832048038078832,0,1.17590876897253,1.04471047896483,1.22308667769421,0.171986032471617,0.483781656445426,0.365446585430928,0.739039113478883,0.193978032976839,0.353024506766001,0.90392296312213,0,0.397429223405979,1.07628353124994,0.977756913674015,0.721429382263803,0.640358984218058,0.599428828746391,1.00863292007874,0.687219576995494,0.686379991447858,1.00838358591705,1.11827282008889,0.942776138467182,0.407712618220842,0.418411385249333,0.305994652908965,0.288950589901519,0,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0.134366944973453,0,0,0.551482276150566,1.31865373409866,1.01105315781277,3.24810688998671,0,0,0.681017030557878,1.92903778158023,2.88832816854191,3.32352270423348,0,0,1.64023802976667,0.335434687599266,1.57611414598396,3.35709364063988,0.422401346077626,0,0.959575986597226,0,0,0.76280561296425,0,0,0,1.19730191562487,0.903017728242729,0.170388021785422,0.113312091520126,1.31897010310274,1.32506888912221,0.904980694530854,0.92562821219883,1.88195521672762,0,0.533937062838473,0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| ||
|short_description=p3@TOM1L1 | |||
}} | }} |
Latest revision as of 06:34, 16 September 2015
Short description: | p3@TOM1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TOM1L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000445275, NM_005486, uc002iub.2, uc002iuc.2, uc002iud.2, uc010dbz.2, uc010dca.1, uc010wnb.1, uc010wnc.1, uc010wnd.1_5end |
EntrezGene: | TOM1L1 |
HGNC: | 11983 |
UniProt: | O75674Q8N749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.24e-10 | 253 |
keratinocyte | 2.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 5.70e-09 | 223 |
ecto-epithelium | 3.17e-08 | 104 |
frontal cortex | 8.41e-07 | 3 |
pre-chordal neural plate | 9.16e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.56e-17 | 106 |
cell type cancer | 6.30e-12 | 143 |
gastrointestinal system cancer | 1.10e-07 | 14 |
cancer | 4.95e-07 | 235 |
cervical cancer | 5.65e-07 | 5 |