FFCP PHASE1:Hg19::chr19:42038090..42038109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:42038090..42038109,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr19:42038090..42038109,+ | |description=CAGE_peak_at_chr19:42038090..42038109,+ | ||
|id=chr19:42038090..42038109,+ | |id=chr19:42038090..42038109,+ | ||
|ontology_enrichment_celltype=CL:0000037!7.11e-31!172;CL:0000566!7.11e-31!172;CL:0002031!1.59e-28!124;CL:0002032!4.25e-28!165;CL:0000837!4.25e-28!165;CL:0000542!5.77e-28!53;CL:0000051!5.77e-28!53;CL:0000738!6.34e-28!140;CL:0000988!1.22e-27!182;CL:0000838!8.64e-27!52;CL:0002087!9.29e-26!119;CL:0000945!1.39e-24!24;CL:0000826!1.39e-24!24;CL:0000236!8.64e-15!14;CL:0000763!2.37e-07!112;CL:0000049!2.37e-07!112 | |ontology_enrichment_celltype=CL:0000037!7.11e-31!172;CL:0000566!7.11e-31!172;CL:0002031!1.59e-28!124;CL:0002032!4.25e-28!165;CL:0000837!4.25e-28!165;CL:0000542!5.77e-28!53;CL:0000051!5.77e-28!53;CL:0000738!6.34e-28!140;CL:0000988!1.22e-27!182;CL:0000838!8.64e-27!52;CL:0002087!9.29e-26!119;CL:0000945!1.39e-24!24;CL:0000826!1.39e-24!24;CL:0000236!8.64e-15!14;CL:0000763!2.37e-07!112;CL:0000049!2.37e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.75e-27;13!CL:0000945;3.28e-27;24!CL:0000784;1.45e-17;3!CL:0000542;3.20e-10;53!CL:0000167;2.23e-07;1!CL:0000164;2.23e-07;1!CL:0000502;2.23e-07;1!CL:0000172;2.23e-07;1!CL:0000946;2.23e-07;1!CL:0000817;2.23e-07;1!CL:0000173;2.23e-07;1!CL:0000786;2.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.60e-32,14;CL:0000945,1.52e-27,24;CL:0000826,1.52e-27,24;CL:0000784,1.01e-17,3;CL:0000542,4.50e-16,53;CL:0000051,4.50e-16,53;CL:0000838,7.91e-14,52;CL:0000738,8.88e-13,136;CL:0002087,5.96e-11,115;CL:0000037,9.57e-11,168;CL:0002031,2.35e-10,120;CL:0000988,5.59e-10,177;CL:0000817,5.26e-09,3;CL:0002032,5.48e-09,161;CL:0000837,5.48e-09,161;CL:0000167,1.86e-07,1;CL:0000164,1.86e-07,1;CL:0000502,1.86e-07,1;CL:0000172,1.86e-07,1;CL:0000173,1.86e-07,1;CL:0002351,1.86e-07,1;CL:0000946,1.98e-07,1;CL:0000786,1.98e-07,1;CL:0000980,1.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.20e-10;53!CL:0002351;2.23e-07;1!UBERON:0005754;2.23e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;1.54e-07;1!DOID:630;1.74e-07;1!DOID:0050177;1.74e-07;1!DOID:0050427;1.74e-07;1!DOID:4430;2.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.55e-07,1;DOID:630,1.75e-07,1;DOID:0050177,1.75e-07,1;DOID:0050427,1.75e-07,1;DOID:4430,1.86e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.69e-10!102;UBERON:0003061!2.69e-10!102;UBERON:0002193!1.09e-09!112;UBERON:0004177!2.23e-08!7 | |ontology_enrichment_uberon=UBERON:0002390!2.69e-10!102;UBERON:0003061!2.69e-10!102;UBERON:0002193!1.09e-09!112;UBERON:0004177!2.23e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.23e-07;1!UBERON:0006868;2.23e-07;1!UBERON:0002372;5.60e-07;1!UBERON:0001961;5.60e-07;1!UBERON:0001744;5.60e-07;1!UBERON:0001042;5.60e-07;1!UBERON:0001735;5.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.37e-07,1;UBERON:0006868,2.37e-07,1 | |||
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|short_description=p@chr19:42038090..42038109,+ | |short_description=p@chr19:42038090..42038109,+ | ||
}} | }} |
Latest revision as of 08:33, 26 July 2015
Short description: | p@chr19:42038090..42038109, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42038090..42038109, + |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.60e-32 | 14 |
lymphocyte of B lineage | 1.52e-27 | 24 |
pro-B cell | 1.52e-27 | 24 |
plasmacytoid dendritic cell | 1.01e-17 | 3 |
lymphocyte | 4.50e-16 | 53 |
common lymphoid progenitor | 4.50e-16 | 53 |
lymphoid lineage restricted progenitor cell | 7.91e-14 | 52 |
leukocyte | 8.88e-13 | 136 |
nongranular leukocyte | 5.96e-11 | 115 |
hematopoietic stem cell | 9.57e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 2.35e-10 | 120 |
hematopoietic cell | 5.59e-10 | 177 |
precursor B cell | 5.26e-09 | 3 |
hematopoietic oligopotent progenitor cell | 5.48e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.48e-09 | 161 |
peptide hormone secreting cell | 1.86e-07 | 1 |
enteroendocrine cell | 1.86e-07 | 1 |
type D enteroendocrine cell | 1.86e-07 | 1 |
somatostatin secreting cell | 1.86e-07 | 1 |
pancreatic D cell | 1.86e-07 | 1 |
progenitor cell of endocrine pancreas | 1.86e-07 | 1 |
antibody secreting cell | 1.98e-07 | 1 |
plasma cell | 1.98e-07 | 1 |
plasmablast | 1.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.37e-07 | 1 |
seminal fluid secreting gland | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.55e-07 | 1 |
genetic disease | 1.75e-07 | 1 |
monogenic disease | 1.75e-07 | 1 |
xeroderma pigmentosum | 1.75e-07 | 1 |
somatostatinoma | 1.86e-07 | 1 |