FFCP PHASE1:Hg19::chr1:120904659..120904667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000401004_5end | |association_with_transcript=-7bp_to_ENST00000401004_5end | ||
|cluster_id=chr1:120904659..120904667,+ | |||
|coexpression_cluster_id=C600 | |||
|description=CAGE_peak_1_at_ENST00000401004_5end | |description=CAGE_peak_1_at_ENST00000401004_5end | ||
|id=chr1:120904659..120904667,+ | |id=chr1:120904659..120904667,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.46e-19!172;CL:0000566!1.46e-19!172;CL:0002032!4.67e-19!165;CL:0000837!4.67e-19!165;CL:0000988!8.11e-18!182;CL:0000738!6.21e-15!140;CL:0002031!1.62e-14!124;CL:0000763!1.02e-13!112;CL:0000049!1.02e-13!112;CL:0002057!1.39e-13!42;CL:0000860!5.23e-13!45;CL:0002087!7.73e-11!119;CL:0000557!2.63e-09!71;CL:0000839!3.84e-09!70;CL:0000766!3.70e-08!76;CL:0002009!7.56e-08!65;CL:0000219!1.14e-07!390;CL:0000003!1.34e-07!722;CL:0000134!3.93e-07!358;CL:0002194!4.70e-07!63;CL:0000576!4.70e-07!63;CL:0000040!4.70e-07!63;CL:0000559!4.70e-07!63;CL:0000034!6.47e-07!444 | |ontology_enrichment_celltype=CL:0000037!1.46e-19!172;CL:0000566!1.46e-19!172;CL:0002032!4.67e-19!165;CL:0000837!4.67e-19!165;CL:0000988!8.11e-18!182;CL:0000738!6.21e-15!140;CL:0002031!1.62e-14!124;CL:0000763!1.02e-13!112;CL:0000049!1.02e-13!112;CL:0002057!1.39e-13!42;CL:0000860!5.23e-13!45;CL:0002087!7.73e-11!119;CL:0000557!2.63e-09!71;CL:0000839!3.84e-09!70;CL:0000766!3.70e-08!76;CL:0002009!7.56e-08!65;CL:0000219!1.14e-07!390;CL:0000003!1.34e-07!722;CL:0000134!3.93e-07!358;CL:0002194!4.70e-07!63;CL:0000576!4.70e-07!63;CL:0000040!4.70e-07!63;CL:0000559!4.70e-07!63;CL:0000034!6.47e-07!444 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.64e-13,168;CL:0002032,4.17e-13,161;CL:0000837,4.17e-13,161;CL:0000988,9.33e-12,177;CL:0000738,1.38e-11,136;CL:0002031,4.05e-11,120;CL:0000763,4.37e-10,108;CL:0000049,4.37e-10,108;CL:0000860,7.22e-09,42;CL:0002057,7.22e-09,42;CL:0000557,1.72e-07,67;CL:0000839,2.91e-07,66;CL:0000473,4.93e-07,48;CL:0000234,4.93e-07,48;CL:0000766,7.02e-07,72;CL:0002087,7.97e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.43e-09!80;UBERON:0001737!1.67e-08!9;UBERON:0001474!4.44e-08!86;UBERON:0004765!2.03e-07!101;UBERON:0001434!2.03e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!2.43e-09!80;UBERON:0001737!1.67e-08!9;UBERON:0001474!4.44e-08!86;UBERON:0004765!2.03e-07!101;UBERON:0001434!2.03e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.75e-13;9!UBERON:0001557;3.75e-13;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.54e-13,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,4.70627602516243,1.20538905604795,5.11217063271161,3.90346239032406,0.123121058076788,0.816002764977012,0,0.286235987131057,0.136874425072884,0.627713197974014,0.152826811495903,0.0821005894499457,0.236132343941038,4.72037132218685,1.15148819429164,1.85779347979291,0,0,0,0.309868802321207,0.284338464974843,36.7000549168559,0,0,0,0,0,0,1.30858414901608,0.755751887377619,1.21292030593908,0.697287110717054,1.23350366406548,0.929119112685311,0.863077176966451,2.0492856522328,0.47296445977717,0.344745680736619,1.29096936716765,1.35426486594342,0.188242339542605,1.09162460023138,2.02251136000576,0.918251677112708,1.60464513538047,1.27867425159808,0,0.997318288108159,0.852449501065388,0.870627715885752,1.70215567407342,3.73693349397345,0.502497330513487,3.12889751052121,1.3031330682307,3.63239701580021,6.99727508376373,6.64571013625857,4.64761629886272,2.76385589954557,5.2414661377094,0.44931452458598,1.05123824989054,0.803627933485401,2.56511469367124,6.16641699317179,5.84525292046829,8.79981222306614,3.82297027883492,5.33705552318133,7.25441378363062,3.2031678962881,4.59801951963587,6.61044872784862,10.494591299889,0,0,0,6.60856642895129,9.52864557068611,43.9851421574379,0,0,0,9.02807075109662,5.21475626613745,8.5220605032252,17.534405556712,16.4887476190057,10.900418576569,9.30442357251209,3.79125409271022,16.9080542037891,16.2574184449848,27.4611300688139,28.7404018497282,19.7066098299836,5.48660283699624,4.54819407752512,7.31748666634838,36.9388457194066,10.3469533272519,6.18529401868734,7.84361045260459,2.54852331459277,5.20866763085135,3.8018081777935,4.66782869141096,1.66382594500744,0,1.4206635122641,1.64225599384209,0,0.534880391567015,0,0,0,7.67175371061182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.337834441449967,0,0,0,1.31780417436063,0,0.872188104285069,0,0,3.70745706277013,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0.809364721840658,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,5.06328996723799,0.0974370051611986,0.504867548488229,0,3.87950536365149,0,0,0.339121184620975,0,0,0.286804595389004,0,0.132529768321485,0.232387885739037,0,40.3713361401005,70.0756529425594,0,0,0,0,0,25.5542688086063,27.9850585529649,31.5724449147361,25.5882016739154,28.97796606429,27.9979330551094,10.7865046528132,12.7543952331475,12.6966561792309,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,5.14703430895577,0,0,0,0.185176890317059,0,0,1.44331342025273,6.26024186865415,2.7003999674239,0,8.7967247389556,5.13686211033415,1.58040879591855,1.71697232418975,0,0,0,1.87467667973554,2.35174979478403,3.68615252830205,0.0895585227028483,0,0.383382679165211,0,4.93071230474066,1.86595303986695,2.01767934783746,2.14612136824846,8.25472625798198,0,1.17217447210047,0,0,27.9319043794843,7.43148724839503,0,0,0.22001485746285,0,0,46.49165139058,0,0,0.771622122786426,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,1.74306691720059,0,0,0.502257091432126,0,0,0,29.9537500585509,0,0.205476322550383,0.179060963239896,0.448340575974109,0,0,0.128343036279748,0,0,0,0,31.258998831005,0,0,0,0,0,0,1.66376689224646,1.42743191037729,0.473107245101804,1.7571212248907,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,1.2276957863045,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,5.84556898613043,0,0,0.170093705276516,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,94.7202667110437,229.801761450888,0,0.328014645699706,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.255679882248303,0.0890320356467374,0,0,4.97689578728878,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,2.62357900818653,0,0,0.563391205064483,12.1899649373444,1.8667317792493,0,0,0,0,0,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.557409525377156,0.144269212976445,0.0711418433484141,0,0.199579371432817,55.345051968254,0,25.9697552219644,0,0.684704037099577,0.156679895773023,57.6459297307154,43.6772786728136,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0.166849141711909,0.19538809540204,0.278406173895242,1.23087398947712,23.2591883489345,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0,1.67121139316383,9.2059051058118,0,0.994147647766298,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0.227586896570999,0.254253650292766,0,0.344743373241465,0,0.347249989866585,0.885741385813839,0,9.15490417902499,0,0,0,0,0,0,0,0,0.0897576444097721,0,2.55200927785536,5.03786763710243,0,1.02193298195737,0,0,0.451191321234361,0.19606253431774,0.839107934879214,0,0,0.210998064528027,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0,0,0,0,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| ||
|short_description=p1@ENST00000401004 | |short_description=p1@ENST00000401004 | ||
}} | }} |
Latest revision as of 20:21, 27 July 2015
Short description: | p1@ENST00000401004 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000401004_5end |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | -7bp_to_ENST00000401004_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.64e-13 | 168 |
hematopoietic oligopotent progenitor cell | 4.17e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.17e-13 | 161 |
hematopoietic cell | 9.33e-12 | 177 |
leukocyte | 1.38e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 4.05e-11 | 120 |
myeloid cell | 4.37e-10 | 108 |
common myeloid progenitor | 4.37e-10 | 108 |
classical monocyte | 7.22e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.22e-09 | 42 |
granulocyte monocyte progenitor cell | 1.72e-07 | 67 |
myeloid lineage restricted progenitor cell | 2.91e-07 | 66 |
defensive cell | 4.93e-07 | 48 |
phagocyte | 4.93e-07 | 48 |
myeloid leukocyte | 7.02e-07 | 72 |
nongranular leukocyte | 7.97e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.54e-13 | 9 |