FFCP PHASE1:Hg19::chr1:154581144..154581155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=103 | |EntrezGene=103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=225 | |HGNC=225 | ||
|TSSclassifier=strong | |||
|UniProt=P55265 | |UniProt=P55265 | ||
|association_with_transcript=-420bp_to_NM_001111,NM_015840,NM_015841_5end | |association_with_transcript=-420bp_to_NM_001111,NM_015840,NM_015841_5end | ||
|cluster_id=chr1:154581144..154581155,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_17_at_ADAR_5end | |description=CAGE_peak_17_at_ADAR_5end | ||
|id=chr1:154581144..154581155,- | |id=chr1:154581144..154581155,- | ||
|ontology_enrichment_celltype=CL:0002319!4.86e-12!25;CL:0002322!3.41e-11!5;CL:0000133!4.99e-10!59;CL:0000221!3.60e-08!71;CL:0000095!2.25e-07!17;CL:0000123!2.25e-07!17 | |ontology_enrichment_celltype=CL:0002319!4.86e-12!25;CL:0002322!3.41e-11!5;CL:0000133!4.99e-10!59;CL:0000221!3.60e-08!71;CL:0000095!2.25e-07!17;CL:0000123!2.25e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002322;7.40e-53;5!CL:0000540;9.27e-26;6!CL:0000404;9.27e-26;6!CL:0002321;5.92e-18;15!CL:0000148;1.54e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.30e-53,5;CL:0000540,1.10e-25,6;CL:0000031,1.10e-25,6;CL:0000404,1.10e-25,6;CL:0000047,1.88e-19,8;CL:0000148,1.47e-07,10;CL:0000541,1.47e-07,10;CL:0000133,7.38e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;9.27e-26;6!UBERON:0009117;1.73e-07;10!UBERON:0005564;1.73e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;2.66e-07;22!DOID:2994;2.66e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.75e-07,22;DOID:2994,2.75e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.45e-18!82;UBERON:0005743!5.02e-17!86;UBERON:0000073!1.84e-16!94;UBERON:0001016!1.84e-16!94;UBERON:0001049!4.45e-14!57;UBERON:0005068!4.45e-14!57;UBERON:0006241!4.45e-14!57;UBERON:0007135!4.45e-14!57;UBERON:0000955!3.16e-13!69;UBERON:0006238!3.16e-13!69;UBERON:0003075!2.11e-11!86;UBERON:0007284!2.11e-11!86;UBERON:0002616!7.31e-11!59;UBERON:0002346!1.54e-10!90;UBERON:0004121!1.07e-09!169;UBERON:0002780!2.01e-09!41;UBERON:0001890!2.01e-09!41;UBERON:0006240!2.01e-09!41;UBERON:0000924!3.23e-09!173;UBERON:0006601!3.23e-09!173;UBERON:0003080!4.27e-09!42;UBERON:0003056!2.66e-08!61;UBERON:0001893!5.28e-08!34;UBERON:0002791!3.19e-07!33;UBERON:0002020!6.47e-07!34;UBERON:0003528!6.47e-07!34 | |ontology_enrichment_uberon=UBERON:0001017!2.45e-18!82;UBERON:0005743!5.02e-17!86;UBERON:0000073!1.84e-16!94;UBERON:0001016!1.84e-16!94;UBERON:0001049!4.45e-14!57;UBERON:0005068!4.45e-14!57;UBERON:0006241!4.45e-14!57;UBERON:0007135!4.45e-14!57;UBERON:0000955!3.16e-13!69;UBERON:0006238!3.16e-13!69;UBERON:0003075!2.11e-11!86;UBERON:0007284!2.11e-11!86;UBERON:0002616!7.31e-11!59;UBERON:0002346!1.54e-10!90;UBERON:0004121!1.07e-09!169;UBERON:0002780!2.01e-09!41;UBERON:0001890!2.01e-09!41;UBERON:0006240!2.01e-09!41;UBERON:0000924!3.23e-09!173;UBERON:0006601!3.23e-09!173;UBERON:0003080!4.27e-09!42;UBERON:0003056!2.66e-08!61;UBERON:0001893!5.28e-08!34;UBERON:0002791!3.19e-07!33;UBERON:0002020!6.47e-07!34;UBERON:0003528!6.47e-07!34 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.85870796139317,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822405995998037,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,1.34171076742555,5.83130980614535,1.74290914304278,0.932949495138334,2.01856680700503,5.83963774521328,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,1.27523445472584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.422008249231538,0,0,0,0,0,0,0.409074730008619,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0.291604613383254,0,0,0,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0,0,0,0.343972064943233,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0.189932387867636,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0.248505071130865,0.235694034616795,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0.0984274815147488,0,0,0.408610218334727,5.14410075088061,5.63911690048659,3.73896304226267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.332787154610557,0.124192805882767,0.138348634936231,0.124980407962107,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0.163771917510097,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0.235676547101626,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,1.13549782351571,1.09265571963696,0,1.83579893535567,0.26721740526556,0.18378979906969,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p17@ADAR | |short_description=p17@ADAR | ||
}} | }} |
Latest revision as of 09:47, 17 September 2015
Short description: | p17@ADAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ADAR_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -420bp_to_NM_001111, NM_015840, NM_015841_5end |
EntrezGene: | ADAR |
HGNC: | 225 |
UniProt: | P55265 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.30e-53 | 5 |
neuron | 1.10e-25 | 6 |
neuroblast | 1.10e-25 | 6 |
electrically signaling cell | 1.10e-25 | 6 |
neuronal stem cell | 1.88e-19 | 8 |
melanocyte | 1.47e-07 | 10 |
melanoblast | 1.47e-07 | 10 |
neurectodermal cell | 7.38e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.75e-07 | 22 |
germ cell cancer | 2.75e-07 | 22 |