FFCP PHASE1:Hg19::chr1:236056317..236056332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:236056317..236056332,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr1:236056317..236056332,+ | |description=CAGE_peak_at_chr1:236056317..236056332,+ | ||
|id=chr1:236056317..236056332,+ | |id=chr1:236056317..236056332,+ | ||
|ontology_enrichment_celltype=CL:0002541!5.37e-14!3;CL:0000039!1.07e-12!7;CL:0000586!1.07e-12!7;CL:0002563!1.69e-10!4 | |ontology_enrichment_celltype=CL:0002541!5.37e-14!3;CL:0000039!1.07e-12!7;CL:0000586!1.07e-12!7;CL:0002563!1.69e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.18e-25;3!CL:0002231;3.25e-07;3!CL:0000182;4.43e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.87e-25,3;CL:0002231,3.35e-07,3;CL:0000182,4.43e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.72e-07;11 | |||
|ontology_enrichment_disease=DOID:225!1.33e-10!1 | |ontology_enrichment_disease=DOID:225!1.33e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.00e-17!14;UBERON:0000158!6.00e-17!14;UBERON:0000476!5.37e-14!3;UBERON:0000920!5.37e-14!3;UBERON:0003124!5.39e-13!7;UBERON:0001242!1.69e-10!4;UBERON:0001262!1.69e-10!4;UBERON:0004786!1.69e-10!4;UBERON:0004808!1.69e-10!4;UBERON:0001277!1.69e-10!4;UBERON:0000478!7.65e-10!24;UBERON:0007499!1.31e-09!25;UBERON:0009856!3.11e-09!26;UBERON:0003350!1.43e-08!5;UBERON:0002107!1.79e-08!19;UBERON:0006925!1.79e-08!19;UBERON:0008836!1.79e-08!19;UBERON:0003929!4.54e-08!54;UBERON:0000060!1.13e-07!12;UBERON:0004923!1.73e-07!57;UBERON:0008835!2.47e-07!22;UBERON:0003894!2.47e-07!22;UBERON:0009854!5.08e-07!23 | |ontology_enrichment_uberon=UBERON:0005631!6.00e-17!14;UBERON:0000158!6.00e-17!14;UBERON:0000476!5.37e-14!3;UBERON:0000920!5.37e-14!3;UBERON:0003124!5.39e-13!7;UBERON:0001242!1.69e-10!4;UBERON:0001262!1.69e-10!4;UBERON:0004786!1.69e-10!4;UBERON:0004808!1.69e-10!4;UBERON:0001277!1.69e-10!4;UBERON:0000478!7.65e-10!24;UBERON:0007499!1.31e-09!25;UBERON:0009856!3.11e-09!26;UBERON:0003350!1.43e-08!5;UBERON:0002107!1.79e-08!19;UBERON:0006925!1.79e-08!19;UBERON:0008836!1.79e-08!19;UBERON:0003929!4.54e-08!54;UBERON:0000060!1.13e-07!12;UBERON:0004923!1.73e-07!57;UBERON:0008835!2.47e-07!22;UBERON:0003894!2.47e-07!22;UBERON:0009854!5.08e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.18e-25;3!UBERON:0000920;5.18e-25;3!UBERON:0002107;1.15e-15;19!UBERON:0006925;1.15e-15;19!UBERON:0002423;5.38e-12;25!UBERON:0002365;1.18e-09;31!UBERON:0002330;1.18e-09;31!UBERON:0005631;3.44e-08;10!UBERON:0000158;3.44e-08;10!UBERON:0002368;3.61e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.87e-25,3;UBERON:0002107,1.15e-15,19;UBERON:0006925,1.15e-15,19;UBERON:0008836,1.15e-15,19;UBERON:0008835,1.39e-13,22;UBERON:0003894,1.39e-13,22;UBERON:0009854,5.23e-13,23;UBERON:0007499,5.38e-12,25;UBERON:0009497,5.38e-12,25;UBERON:0000015,5.38e-12,25;UBERON:0002423,5.38e-12,25;UBERON:0006235,5.38e-12,25;UBERON:0004161,5.38e-12,25;UBERON:0003929,6.70e-12,54;UBERON:0009856,1.51e-11,26;UBERON:0003124,2.55e-11,7;UBERON:0002365,9.77e-10,31;UBERON:0002330,9.77e-10,31;UBERON:0002368,1.17e-08,35;UBERON:0005911,8.92e-08,82;UBERON:0002530,9.68e-08,59;UBERON:0000949,8.65e-07,45 | |||
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|short_description=p@chr1:236056317..236056332,+ | |short_description=p@chr1:236056317..236056332,+ | ||
}} | }} |
Latest revision as of 05:24, 28 July 2015
Short description: | p@chr1:236056317..236056332, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236056317..236056332, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.87e-25 | 3 |
epithelial cell of prostate | 3.35e-07 | 3 |
hepatocyte | 4.43e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.87e-25 | 3 |
liver | 1.15e-15 | 19 |
digestive gland | 1.15e-15 | 19 |
liver bud | 1.15e-15 | 19 |
hepatic diverticulum | 1.39e-13 | 22 |
liver primordium | 1.39e-13 | 22 |
digestive tract diverticulum | 5.23e-13 | 23 |
epithelial sac | 5.38e-12 | 25 |
epithelium of foregut-midgut junction | 5.38e-12 | 25 |
anatomical boundary | 5.38e-12 | 25 |
hepatobiliary system | 5.38e-12 | 25 |
foregut-midgut junction | 5.38e-12 | 25 |
septum transversum | 5.38e-12 | 25 |
gut epithelium | 6.70e-12 | 54 |
sac | 1.51e-11 | 26 |
chorion | 2.55e-11 | 7 |
exocrine gland | 9.77e-10 | 31 |
exocrine system | 9.77e-10 | 31 |
endocrine gland | 1.17e-08 | 35 |
endo-epithelium | 8.92e-08 | 82 |
gland | 9.68e-08 | 59 |
endocrine system | 8.65e-07 | 45 |