FFCP PHASE1:Hg19::chr3:186794378..186794390,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=160bp_to_AF007133_5end | |association_with_transcript=160bp_to_AF007133_5end | ||
|cluster_id=chr3:186794378..186794390,+ | |||
|coexpression_cluster_id=C4310 | |||
|description=CAGE_peak_17_at_ST6GAL1_5end | |description=CAGE_peak_17_at_ST6GAL1_5end | ||
|id=chr3:186794378..186794390,+ | |id=chr3:186794378..186794390,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.83e-09!24;CL:0000826!1.83e-09!24;CL:0002139!7.56e-08!24;CL:0000542!2.78e-07!53;CL:0000051!2.78e-07!53 | |ontology_enrichment_celltype=CL:0000945!1.83e-09!24;CL:0000826!1.83e-09!24;CL:0002139!7.56e-08!24;CL:0000542!2.78e-07!53;CL:0000051!2.78e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.01e-16;12!CL:1000415;2.35e-07;2!CL:0002262;4.55e-07;2!CL:1000398;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.64e-16,12;CL:1000415,2.28e-07,2;CL:0002262,4.42e-07,2;CL:1000398,4.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;3.14e-13;1!DOID:630;7.23e-13;1!DOID:0050177;7.23e-13;1!DOID:0050427;7.23e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.23e-13,1;DOID:630,5.38e-13,1;DOID:0050177,5.38e-13,1;DOID:0050427,5.38e-13,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;8.29e-17;25!UBERON:0002107;1.38e-15;19!UBERON:0006925;1.38e-15;19!UBERON:0002365;1.59e-09;31!UBERON:0002330;1.59e-09;31!UBERON:0005172;4.06e-09;52!UBERON:0005173;4.06e-09;52!UBERON:0002368;2.75e-08;33!UBERON:0001281;4.55e-07;2!UBERON:0003497;4.55e-07;2!UBERON:0003909;4.55e-07;2!UBERON:0003835;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,7.95e-17,25;UBERON:0000015,7.95e-17,25;UBERON:0002423,7.95e-17,25;UBERON:0006235,7.95e-17,25;UBERON:0004161,7.95e-17,25;UBERON:0002107,1.34e-15,19;UBERON:0006925,1.34e-15,19;UBERON:0008836,1.34e-15,19;UBERON:0008835,1.81e-13,22;UBERON:0003894,1.81e-13,22;UBERON:0009854,7.01e-13,23;UBERON:0007499,7.61e-12,25;UBERON:0009856,2.19e-11,26;UBERON:0005172,3.66e-10,54;UBERON:0005173,3.66e-10,54;UBERON:0002365,1.55e-09,31;UBERON:0002330,1.55e-09,31;UBERON:0002417,4.40e-09,60;UBERON:0000916,4.40e-09,60;UBERON:0002368,1.97e-08,35;UBERON:0003929,1.36e-07,54;UBERON:0001281,4.42e-07,2;UBERON:0003497,4.42e-07,2;UBERON:0003909,4.42e-07,2;UBERON:0003835,4.42e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.0787107813136792,0,0,0.464448369948228,0,0,0,0.619737604642413,0.853015394924529,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0.209658645508376,0,0.450530678524519,0,0,0.19891667719909,0.365328307529268,0,0,2.66852776159066,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0.883817722424512,0.443067789167242,0.812411591295047,0.25618263945135,0.130059347559878,0.822189523018381,0.552700035571697,0.289803085735052,0.296573126324121,0.267540828089713,0,0.339928028092699,0,0,0.506039384039006,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0.370784442784429,0.324547393654683,0,0.664789802594326,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.775250277507987,0.71153252537342,0,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.265059536642971,0,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,5.07020139287323,7.86261773342101,2.95394953340702,0,0.860919069801795,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,1.71228737011138,0,0,0.492434012174795,0,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0.764637207142375,0.569647187174163,0.714695326373367,0,0,1.08006287447623,0.79312517629427,0,0,0,2.22963810150862,0.144269212976445,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0.280797178113459,0.456469358066384,0.156679895773023,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0.63337622438398,0.398495976502139,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,2.3948309234694,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0.392125068635479,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.067401132980677,0,0.468528891450678,0.91227394607833,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0.189932387867636,5.86654148204409,0,0,0,0.864542502924636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0,0,0.630265458457789,0.824158583811665,0.606631894687664,0,0,0,0.136203406111576,0.321506296930038,0.687697182986169,2.49264202817511,0,0,0.0607495566580247,0,0.236417121897595,0.104909176269996,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,2.34483573884932,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0.988058159489721,0.243585196761792,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0,0.332787154610557,0.124192805882767,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,0.982829546539238,0,0,0,0,0.172214979660816,0,0,0,0,0,0.323474434190045,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0.345701962667338,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0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| ||
|short_description=p17@ST6GAL1 | |short_description=p17@ST6GAL1 | ||
}} | }} |
Latest revision as of 06:17, 17 September 2015
Short description: | p17@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ST6GAL1_5end |
Coexpression cluster: | C4310_Hepatocyte_gall_smallcell_liver_iPS_acute_xeroderma |
Association with transcript: | 160bp_to_AF007133_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.64e-16 | 12 |
epithelial cell of gall bladder | 2.28e-07 | 2 |
endothelial cell of sinusoid | 4.42e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 7.95e-17 | 25 |
anatomical boundary | 7.95e-17 | 25 |
hepatobiliary system | 7.95e-17 | 25 |
foregut-midgut junction | 7.95e-17 | 25 |
septum transversum | 7.95e-17 | 25 |
liver | 1.34e-15 | 19 |
digestive gland | 1.34e-15 | 19 |
liver bud | 1.34e-15 | 19 |
hepatic diverticulum | 1.81e-13 | 22 |
liver primordium | 1.81e-13 | 22 |
digestive tract diverticulum | 7.01e-13 | 23 |
epithelial sac | 7.61e-12 | 25 |
sac | 2.19e-11 | 26 |
abdomen element | 3.66e-10 | 54 |
abdominal segment element | 3.66e-10 | 54 |
exocrine gland | 1.55e-09 | 31 |
exocrine system | 1.55e-09 | 31 |
abdominal segment of trunk | 4.40e-09 | 60 |
abdomen | 4.40e-09 | 60 |
endocrine gland | 1.97e-08 | 35 |
gut epithelium | 1.36e-07 | 54 |
hepatic sinusoid | 4.42e-07 | 2 |
abdomen blood vessel | 4.42e-07 | 2 |
sinusoid | 4.42e-07 | 2 |
abdominal segment blood vessel | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.23e-13 | 1 |
genetic disease | 5.38e-13 | 1 |
monogenic disease | 5.38e-13 | 1 |
xeroderma pigmentosum | 5.38e-13 | 1 |