FFCP PHASE1:Hg19::chr11:123079774..123079777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:123079774..123079777,+ | |||
|coexpression_cluster_id=C585 | |coexpression_cluster_id=C585 | ||
|description=CAGE_peak_at_chr11:123079774..123079777,+ | |description=CAGE_peak_at_chr11:123079774..123079777,+ | ||
|id=chr11:123079774..123079777,+ | |id=chr11:123079774..123079777,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.22e-25!42;CL:0000860!1.03e-23!45;CL:0002194!1.05e-15!63;CL:0000576!1.05e-15!63;CL:0000040!1.05e-15!63;CL:0000559!1.05e-15!63;CL:0002009!3.94e-15!65;CL:0000839!7.72e-14!70;CL:0000557!1.33e-13!71;CL:0000766!1.64e-12!76;CL:0002166!1.72e-08!3;CL:0002541!2.57e-08!3;CL:0000763!1.56e-07!112;CL:0000049!1.56e-07!112;CL:0002087!6.43e-07!119 | |ontology_enrichment_celltype=CL:0002057!1.22e-25!42;CL:0000860!1.03e-23!45;CL:0002194!1.05e-15!63;CL:0000576!1.05e-15!63;CL:0000040!1.05e-15!63;CL:0000559!1.05e-15!63;CL:0002009!3.94e-15!65;CL:0000839!7.72e-14!70;CL:0000557!1.33e-13!71;CL:0000766!1.64e-12!76;CL:0002166!1.72e-08!3;CL:0002541!2.57e-08!3;CL:0000763!1.56e-07!112;CL:0000049!1.56e-07!112;CL:0002087!6.43e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002166;4.65e-20;3!CL:0000860;3.28e-18;33!CL:0002057;3.28e-18;33!CL:0000473;1.89e-13;39!CL:0000234;1.89e-13;39!CL:0000576;1.59e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,4.88e-20,3;CL:0000860,4.47e-16,42;CL:0002057,4.47e-16,42;CL:0000473,5.20e-14,48;CL:0000234,5.20e-14,48;CL:0002194,4.13e-11,59;CL:0000576,4.13e-11,59;CL:0000040,4.13e-11,59;CL:0000559,4.13e-11,59;CL:0002009,9.79e-11,61;CL:0000839,6.77e-10,66;CL:0000557,9.64e-10,67;CL:0000766,4.88e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.64e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.79e-12!80;UBERON:0004765!1.35e-11!101;UBERON:0001434!1.35e-11!101;UBERON:0001474!1.04e-10!86;UBERON:0002193!4.47e-10!112;UBERON:0002405!1.01e-09!115;UBERON:0002390!1.46e-08!102;UBERON:0003061!1.46e-08!102;UBERON:0000476!2.57e-08!3;UBERON:0000920!2.57e-08!3;UBERON:0002204!2.04e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!9.79e-12!80;UBERON:0004765!1.35e-11!101;UBERON:0001434!1.35e-11!101;UBERON:0001474!1.04e-10!86;UBERON:0002193!4.47e-10!112;UBERON:0002405!1.01e-09!115;UBERON:0002390!1.46e-08!102;UBERON:0003061!1.46e-08!102;UBERON:0000476!2.57e-08!3;UBERON:0000920!2.57e-08!3;UBERON:0002204!2.04e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.66e-15;4!UBERON:0008895;2.66e-15;4!UBERON:0011159;1.95e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.76e-15,4;UBERON:0008895,2.76e-15,4;UBERON:0011159,2.00e-12,5;UBERON:0004765,8.79e-12,90;UBERON:0001434,1.59e-10,100;UBERON:0010188,1.65e-10,6;UBERON:0002539,1.65e-10,6;UBERON:0008816,1.65e-10,6;UBERON:0002405,5.74e-09,93;UBERON:0002371,1.53e-08,76;UBERON:0001474,6.97e-08,82;UBERON:0002193,1.26e-07,108 | |||
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|short_description=p@chr11:123079774..123079777,+ | |short_description=p@chr11:123079774..123079777,+ | ||
}} | }} |
Latest revision as of 19:23, 23 July 2015
Short description: | p@chr11:123079774..123079777, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:123079774..123079777, + |
Coexpression cluster: | C585_Mallassezderived_amniotic_Small_chorionic_nasal_Keratinocyte_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 4.88e-20 | 3 |
classical monocyte | 4.47e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.47e-16 | 42 |
defensive cell | 5.20e-14 | 48 |
phagocyte | 5.20e-14 | 48 |
monopoietic cell | 4.13e-11 | 59 |
monocyte | 4.13e-11 | 59 |
monoblast | 4.13e-11 | 59 |
promonocyte | 4.13e-11 | 59 |
macrophage dendritic cell progenitor | 9.79e-11 | 61 |
myeloid lineage restricted progenitor cell | 6.77e-10 | 66 |
granulocyte monocyte progenitor cell | 9.64e-10 | 67 |
myeloid leukocyte | 4.88e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.76e-15 | 4 |
splanchnocranium | 2.76e-15 | 4 |
primary subdivision of cranial skeletal system | 2.00e-12 | 5 |
skeletal element | 8.79e-12 | 90 |
skeletal system | 1.59e-10 | 100 |
protuberance | 1.65e-10 | 6 |
pharyngeal arch | 1.65e-10 | 6 |
embryonic head | 1.65e-10 | 6 |
immune system | 5.74e-09 | 93 |
bone marrow | 1.53e-08 | 76 |
bone element | 6.97e-08 | 82 |
hemolymphoid system | 1.26e-07 | 108 |