FFCP PHASE1:Hg19::chr11:17741228..17741243,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4654 | |EntrezGene=4654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7611 | |HGNC=7611 | ||
|TSSclassifier=strong | |||
|UniProt=P15172 | |UniProt=P15172 | ||
|association_with_transcript=113bp_to_ENST00000250003_5end | |association_with_transcript=113bp_to_ENST00000250003_5end | ||
|cluster_id=chr11:17741228..17741243,+ | |||
|coexpression_cluster_id=C797 | |coexpression_cluster_id=C797 | ||
|description=CAGE_peak_4_at_MYOD1_5end | |description=CAGE_peak_4_at_MYOD1_5end | ||
|id=chr11:17741228..17741243,+ | |id=chr11:17741228..17741243,+ | ||
|ontology_enrichment_celltype=CL:0000188!3.35e-41!9;CL:0000515!3.52e-24!4;CL:0002603!1.66e-18!3;CL:0000680!1.51e-10!57;CL:0000056!1.51e-10!57;CL:0000355!1.51e-10!57;CL:0000594!1.14e-08!3;CL:0000128!3.22e-08!7;CL:0000126!3.22e-08!7;CL:0000127!3.22e-08!7;CL:0002453!3.22e-08!7;CL:0002242!1.54e-07!1;CL:0000228!1.54e-07!1;CL:0002372!1.54e-07!1;CL:0000183!9.14e-07!59 | |ontology_enrichment_celltype=CL:0000188!3.35e-41!9;CL:0000515!3.52e-24!4;CL:0002603!1.66e-18!3;CL:0000680!1.51e-10!57;CL:0000056!1.51e-10!57;CL:0000355!1.51e-10!57;CL:0000594!1.14e-08!3;CL:0000128!3.22e-08!7;CL:0000126!3.22e-08!7;CL:0000127!3.22e-08!7;CL:0002453!3.22e-08!7;CL:0002242!1.54e-07!1;CL:0000228!1.54e-07!1;CL:0002372!1.54e-07!1;CL:0000183!9.14e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000228;3.91e-19;1!CL:0002372;3.91e-19;1!CL:0000056;8.88e-19;4!CL:0000680;3.66e-11;7!CL:0002575;1.50e-10;2!CL:0002262;2.99e-10;2!CL:1000398;2.99e-10;2!CL:0000188;5.87e-09;9!CL:0002603;2.32e-07;3!CL:0000515;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.25e-19,1;CL:0002372,3.25e-19,1;CL:0000515,6.77e-19,4;CL:0002575,1.43e-10,2;CL:0002262,2.99e-10,2;CL:1000398,2.99e-10,2;CL:0000188,5.42e-09,9;CL:0002603,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;8.88e-19;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;2.38e-18;16!UBERON:0002036;2.38e-18;16!UBERON:0001281;2.99e-10;2!UBERON:0003497;2.99e-10;2!UBERON:0003909;2.99e-10;2!UBERON:0003835;2.99e-10;2!UBERON:0002385;1.45e-09;31!UBERON:0001015;1.45e-09;31!UBERON:0000383;1.45e-09;31!UBERON:0001723;2.97e-07;3!UBERON:0001280;2.97e-07;3!UBERON:0004647;2.97e-07;3!UBERON:0001033;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.99e-10,2;UBERON:0003497,2.99e-10,2;UBERON:0003909,2.99e-10,2;UBERON:0003835,2.99e-10,2;UBERON:0001280,2.97e-07,3;UBERON:0004647,2.97e-07,3;UBERON:0005171,2.97e-07,3;UBERON:0001723,3.35e-07,3;UBERON:0001033,3.35e-07,3;UBERON:0010056,3.35e-07,3 | |||
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|short_description=p4@MYOD1 | |short_description=p4@MYOD1 | ||
}} | }} |
Latest revision as of 00:42, 17 September 2015
Short description: | p4@MYOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYOD1_5end |
Coexpression cluster: | C797_mesenchymal_skeletal_Endothelial_Pericytes_Skeletal_Astrocyte_left |
Association with transcript: | 113bp_to_ENST00000250003_5end |
EntrezGene: | MYOD1 |
HGNC: | 7611 |
UniProt: | P15172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.25e-19 | 1 |
myotube | 3.25e-19 | 1 |
skeletal muscle myoblast | 6.77e-19 | 4 |
central nervous system pericyte | 1.43e-10 | 2 |
endothelial cell of sinusoid | 2.99e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.99e-10 | 2 |
cell of skeletal muscle | 5.42e-09 | 9 |
astrocyte of the cerebellum | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.99e-10 | 2 |
abdomen blood vessel | 2.99e-10 | 2 |
sinusoid | 2.99e-10 | 2 |
abdominal segment blood vessel | 2.99e-10 | 2 |
liver parenchyma | 2.97e-07 | 3 |
liver lobule | 2.97e-07 | 3 |
hepatic duct | 2.97e-07 | 3 |
tongue | 3.35e-07 | 3 |
gustatory system | 3.35e-07 | 3 |
future tongue | 3.35e-07 | 3 |