FFCP PHASE1:Hg19::chr11:2159997..2160004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_BC017277_5end | |association_with_transcript=-10bp_to_BC017277_5end | ||
|cluster_id=chr11:2159997..2160004,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_15_at_BC017277_5end | |description=CAGE_peak_15_at_BC017277_5end | ||
|id=chr11:2159997..2160004,+ | |id=chr11:2159997..2160004,+ | ||
|ontology_enrichment_celltype=CL:0002541!3.46e-09!3;CL:0002536!8.12e-07!2 | |ontology_enrichment_celltype=CL:0002541!3.46e-09!3;CL:0002536!8.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.31e-32;19!CL:0002536;2.99e-16;2!CL:0002537;7.95e-15;5!CL:0002541;9.28e-12;3!CL:0000182;3.51e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.79e-32,19;CL:0002536,2.56e-16,2;CL:0002537,7.24e-15,5;CL:0002541,9.28e-12,3;CL:0000182,3.38e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.02e-17;11!UBERON:0009497;1.80e-14;13!UBERON:0003104;4.88e-11;31!UBERON:0000358;2.93e-09;1!UBERON:0003124;9.17e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.64e-23!14;UBERON:0000158!8.64e-23!14;UBERON:0000478!2.25e-17!24;UBERON:0003124!3.73e-14!7;UBERON:0000305!1.90e-10!7;UBERON:0000476!3.46e-09!3;UBERON:0000920!3.46e-09!3;UBERON:0004871!4.45e-09!8;UBERON:0001987!6.00e-07!4;UBERON:0004340!6.00e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!8.64e-23!14;UBERON:0000158!8.64e-23!14;UBERON:0000478!2.25e-17!24;UBERON:0003124!3.73e-14!7;UBERON:0000305!1.90e-10!7;UBERON:0000476!3.46e-09!3;UBERON:0000920!3.46e-09!3;UBERON:0004871!4.45e-09!8;UBERON:0001987!6.00e-07!4;UBERON:0004340!6.00e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.08e-37;10!UBERON:0000158;1.08e-37;10!UBERON:0000478;1.95e-37;24!UBERON:0000305;1.15e-27;7!UBERON:0003124;9.28e-12;3!UBERON:0000920;9.28e-12;3!UBERON:0002107;7.42e-10;19!UBERON:0006925;7.42e-10;19!UBERON:0002426;3.72e-09;1!UBERON:0003831;3.72e-09;1!UBERON:0003898;3.72e-09;1!UBERON:0004830;3.72e-09;1!UBERON:0003830;3.72e-09;1!UBERON:0005175;3.72e-09;1!UBERON:0001774;3.72e-09;1!UBERON:0001103;3.72e-09;1!UBERON:0001987;1.25e-08;4!UBERON:0002423;1.91e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.71e-44,14;UBERON:0000158,7.71e-44,14;UBERON:0000478,1.70e-37,24;UBERON:0000305,9.20e-28,7;UBERON:0004871,2.75e-24,8;UBERON:0003124,3.08e-18,7;UBERON:0000920,9.28e-12,3;UBERON:0002107,7.21e-10,19;UBERON:0006925,7.21e-10,19;UBERON:0008836,7.21e-10,19;UBERON:0002426,4.19e-09,1;UBERON:0003831,4.19e-09,1;UBERON:0003898,4.19e-09,1;UBERON:0004830,4.19e-09,1;UBERON:0003830,4.19e-09,1;UBERON:0005175,4.19e-09,1;UBERON:0001774,4.19e-09,1;UBERON:0001103,4.19e-09,1;UBERON:0010084,4.19e-09,1;UBERON:0001987,1.25e-08,4;UBERON:0004340,1.25e-08,4;UBERON:0008835,1.69e-08,22;UBERON:0003894,1.69e-08,22;UBERON:0004923,3.03e-08,66;UBERON:0009854,4.04e-08,23;UBERON:0007499,1.87e-07,25;UBERON:0009497,1.87e-07,25;UBERON:0000015,1.87e-07,25;UBERON:0002423,1.87e-07,25;UBERON:0006235,1.87e-07,25;UBERON:0004161,1.87e-07,25;UBERON:0009856,3.68e-07,26 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.62129646556207,2.90143676051299,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,3.25572963234866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.623912584592421,0,0,0,0,0,0,0,0,0,0.979005787313703,1.71571711905428,0,0,0,0.606255142892519,0,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20735660317994,3.56357616999166,4.60741053148848,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,6.06102203490647,0.183195186803725,13.3258694004659,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,6.04953580243319,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0.39961921916426,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604651252380536,0,0,1.89079637537337,2.06039645952916,1.81989568406299,1.47641222272123,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,1.68534503309014,0,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0.357382720883282,0,0,2.78173235684127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,3.4794432940146,0,0,1.19370465096821,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85677317756488,0,0.124149428591716,0,0,0.606351566874658,0,10.951465634729,0,0,2.32862249582209,0,0,0,0.0898252021065869,4.69281884806909,0,0.813792356631477,0,0,0 | ||
|short_description=p15@BC017277 | |short_description=p15@BC017277 | ||
}} | }} |
Latest revision as of 21:03, 23 July 2015
Short description: | p15@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -10bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.79e-32 | 19 |
amniotic epithelial cell | 2.56e-16 | 2 |
amnion mesenchymal stem cell | 7.24e-15 | 5 |
chorionic membrane mesenchymal stem cell | 9.28e-12 | 3 |
hepatocyte | 3.38e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.71e-44 | 14 |
membranous layer | 7.71e-44 | 14 |
extraembryonic structure | 1.70e-37 | 24 |
amnion | 9.20e-28 | 7 |
somatic layer of lateral plate mesoderm | 2.75e-24 | 8 |
chorion | 3.08e-18 | 7 |
egg chorion | 9.28e-12 | 3 |
liver | 7.21e-10 | 19 |
digestive gland | 7.21e-10 | 19 |
liver bud | 7.21e-10 | 19 |
chest muscle | 4.19e-09 | 1 |
respiratory system muscle | 4.19e-09 | 1 |
skeletal muscle of trunk | 4.19e-09 | 1 |
respiratory system skeletal muscle | 4.19e-09 | 1 |
thoracic segment muscle | 4.19e-09 | 1 |
chest organ | 4.19e-09 | 1 |
muscle of trunk | 4.19e-09 | 1 |
diaphragm | 4.19e-09 | 1 |
future diaphragm | 4.19e-09 | 1 |
placenta | 1.25e-08 | 4 |
allantois | 1.25e-08 | 4 |
hepatic diverticulum | 1.69e-08 | 22 |
liver primordium | 1.69e-08 | 22 |
organ component layer | 3.03e-08 | 66 |
digestive tract diverticulum | 4.04e-08 | 23 |
epithelial sac | 1.87e-07 | 25 |
epithelium of foregut-midgut junction | 1.87e-07 | 25 |
anatomical boundary | 1.87e-07 | 25 |
hepatobiliary system | 1.87e-07 | 25 |
foregut-midgut junction | 1.87e-07 | 25 |
septum transversum | 1.87e-07 | 25 |
sac | 3.68e-07 | 26 |