FFCP PHASE1:Hg19::chr11:7991573..7991621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8665 | |EntrezGene=8665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3275 | |HGNC=3275 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-176bp_to_ENST00000533626_5end | |association_with_transcript=-176bp_to_ENST00000533626_5end | ||
|cluster_id=chr11:7991573..7991621,+ | |||
|coexpression_cluster_id=C465 | |coexpression_cluster_id=C465 | ||
|description=CAGE_peak_4_at_EIF3F_5end | |description=CAGE_peak_4_at_EIF3F_5end | ||
|id=chr11:7991573..7991621,+ | |id=chr11:7991573..7991621,+ | ||
|ontology_enrichment_celltype=CL:0000197!1.08e-16!6;CL:0000098!1.08e-16!6;CL:0002167!1.08e-16!6;CL:0000057!7.88e-14!75;CL:0002620!3.54e-11!23;CL:0000055!2.73e-09!180;CL:0000135!1.02e-08!3;CL:0000386!1.02e-08!3;CL:0000388!1.02e-08!3;CL:0002561!3.40e-07!1 | |ontology_enrichment_celltype=CL:0000197!1.08e-16!6;CL:0000098!1.08e-16!6;CL:0002167!1.08e-16!6;CL:0000057!7.88e-14!75;CL:0002620!3.54e-11!23;CL:0000055!2.73e-09!180;CL:0000135!1.02e-08!3;CL:0000386!1.02e-08!3;CL:0000388!1.02e-08!3;CL:0002561!3.40e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000197;2.63e-59;6!CL:0000098;2.63e-59;6!CL:0002167;2.63e-59;6!CL:0000222;3.67e-23;1!CL:0000710;3.26e-18;20!CL:0000075;1.30e-13;27!CL:0002262;3.62e-12;2!CL:1000398;3.62e-12;2!CL:0002077;8.18e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.63e-59,6;CL:0000098,2.63e-59,6;CL:0002167,2.63e-59,6;CL:0000710,3.27e-18,20;CL:0000075,1.30e-13,27;CL:0002262,3.62e-12,2;CL:1000398,3.62e-12,2;CL:0002077,6.82e-11,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2513!2.10e-07!1;DOID:3369!3.20e-07!1 | |ontology_enrichment_disease=DOID:2513!2.10e-07!1;DOID:3369!3.20e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2513;3.67e-23;1!DOID:3451;2.74e-12;2!DOID:4159;2.74e-12;2!DOID:0060122;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.10e-23,1;DOID:3451,2.90e-12,2;DOID:4159,2.90e-12,2;DOID:0060122,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.51e-11!45;UBERON:0002416!7.51e-11!45;UBERON:0002097!4.54e-10!40;UBERON:0000043!1.02e-08!3;UBERON:0003102!1.48e-07!95;UBERON:0005705!2.67e-07!1;UBERON:0008193!2.67e-07!1;UBERON:0002514!2.67e-07!1;UBERON:0003462!2.67e-07!1;UBERON:0008001!2.67e-07!1;UBERON:0007914!2.67e-07!1;UBERON:0003457!2.67e-07!1;UBERON:0009292!2.67e-07!1;UBERON:0007375!2.67e-07!1;UBERON:0003323!2.67e-07!1;UBERON:0002397!2.67e-07!1;UBERON:0001709!2.67e-07!1;UBERON:0004066!2.67e-07!1;UBERON:0002244!2.67e-07!1;UBERON:0005620!2.67e-07!1;UBERON:0004068!2.67e-07!1;UBERON:0004362!2.67e-07!1;UBERON:0005933!3.40e-07!1;UBERON:0005942!3.40e-07!1;UBERON:0005932!3.40e-07!1 | |ontology_enrichment_uberon=UBERON:0002199!7.51e-11!45;UBERON:0002416!7.51e-11!45;UBERON:0002097!4.54e-10!40;UBERON:0000043!1.02e-08!3;UBERON:0003102!1.48e-07!95;UBERON:0005705!2.67e-07!1;UBERON:0008193!2.67e-07!1;UBERON:0002514!2.67e-07!1;UBERON:0003462!2.67e-07!1;UBERON:0008001!2.67e-07!1;UBERON:0007914!2.67e-07!1;UBERON:0003457!2.67e-07!1;UBERON:0009292!2.67e-07!1;UBERON:0007375!2.67e-07!1;UBERON:0003323!2.67e-07!1;UBERON:0002397!2.67e-07!1;UBERON:0001709!2.67e-07!1;UBERON:0004066!2.67e-07!1;UBERON:0002244!2.67e-07!1;UBERON:0005620!2.67e-07!1;UBERON:0004068!2.67e-07!1;UBERON:0004362!2.67e-07!1;UBERON:0005933!3.40e-07!1;UBERON:0005942!3.40e-07!1;UBERON:0005932!3.40e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.62e-12;2!UBERON:0003497;3.62e-12;2!UBERON:0003909;3.62e-12;2!UBERON:0003835;3.62e-12;2!UBERON:0001280;1.51e-08;3!UBERON:0004647;1.51e-08;3!UBERON:0000014;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,3.62e-12,2;UBERON:0003497,3.62e-12,2;UBERON:0003909,3.62e-12,2;UBERON:0003835,3.62e-12,2;UBERON:0001280,1.51e-08,3;UBERON:0004647,1.51e-08,3;UBERON:0005171,1.51e-08,3;UBERON:0000014,9.11e-07,4 | |||
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|short_description=p4@EIF3F | |short_description=p4@EIF3F | ||
}} | }} |
Latest revision as of 16:53, 24 September 2015
Short description: | p4@EIF3F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EIF3F_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | -176bp_to_ENST00000533626_5end |
EntrezGene: | EIF3F |
HGNC: | 3275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.63e-59 | 6 |
sensory epithelial cell | 2.63e-59 | 6 |
olfactory epithelial cell | 2.63e-59 | 6 |
neurecto-epithelial cell | 3.27e-18 | 20 |
columnar/cuboidal epithelial cell | 1.30e-13 | 27 |
endothelial cell of sinusoid | 3.62e-12 | 2 |
endothelial cell of hepatic sinusoid | 3.62e-12 | 2 |
ecto-epithelial cell | 6.82e-11 | 34 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 3.62e-12 | 2 |
abdomen blood vessel | 3.62e-12 | 2 |
sinusoid | 3.62e-12 | 2 |
abdominal segment blood vessel | 3.62e-12 | 2 |
liver parenchyma | 1.51e-08 | 3 |
liver lobule | 1.51e-08 | 3 |
hepatic duct | 1.51e-08 | 3 |
zone of skin | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.10e-23 | 1 |
skin carcinoma | 2.90e-12 | 2 |
skin cancer | 2.90e-12 | 2 |
integumentary system cancer | 2.90e-12 | 2 |