FFCP PHASE1:Hg19::chr12:11762229..11762247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:11762229..11762247,+ | |||
|coexpression_cluster_id=C130 | |coexpression_cluster_id=C130 | ||
|description=CAGE_peak_at_chr12:11762229..11762247,+ | |description=CAGE_peak_at_chr12:11762229..11762247,+ | ||
|id=chr12:11762229..11762247,+ | |id=chr12:11762229..11762247,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.39e-61!5;CL:0000039!7.32e-29!7;CL:0000586!7.32e-29!7;CL:0000540!9.12e-20!6;CL:0000031!9.12e-20!6;CL:0000404!9.12e-20!6;CL:0000047!5.50e-15!8;CL:0000148!1.41e-11!10;CL:0000541!1.41e-11!10;CL:0000147!1.99e-08!14;CL:0000133!4.98e-07!59 | |ontology_enrichment_celltype=CL:0002322!4.39e-61!5;CL:0000039!7.32e-29!7;CL:0000586!7.32e-29!7;CL:0000540!9.12e-20!6;CL:0000031!9.12e-20!6;CL:0000404!9.12e-20!6;CL:0000047!5.50e-15!8;CL:0000148!1.41e-11!10;CL:0000541!1.41e-11!10;CL:0000147!1.99e-08!14;CL:0000133!4.98e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.44e-45;5!CL:0000039;1.01e-32;7!CL:0000586;1.01e-32;7!CL:0000540;2.36e-22;6!CL:0000404;2.36e-22;6!CL:0002321;2.58e-15;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.58e-45,5;CL:0000039,9.69e-33,7;CL:0000586,9.69e-33,7;CL:0000540,2.28e-22,6;CL:0000031,2.28e-22,6;CL:0000404,2.28e-22,6;CL:0000047,5.98e-17,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.51e-35;10!UBERON:0005564;1.51e-35;10!CL:0000031;2.36e-22;6 | |||
|ontology_enrichment_disease=DOID:3095!3.68e-20!22;DOID:2994!3.68e-20!22 | |ontology_enrichment_disease=DOID:3095!3.68e-20!22;DOID:2994!3.68e-20!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.87e-23;22!DOID:2994;5.87e-23;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.44e-23,22;DOID:2994,5.44e-23,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.63e-25!8;UBERON:0003135!1.67e-18!11;UBERON:0000991!6.26e-15!21;UBERON:0009196!6.26e-15!21;UBERON:0009117!6.26e-15!21;UBERON:0005564!6.26e-15!21;UBERON:0004176!2.99e-14!22;UBERON:0003101!2.19e-09!22;UBERON:0000079!2.19e-09!22;UBERON:0002323!9.01e-07!46 | |ontology_enrichment_uberon=UBERON:0000473!2.63e-25!8;UBERON:0003135!1.67e-18!11;UBERON:0000991!6.26e-15!21;UBERON:0009196!6.26e-15!21;UBERON:0009117!6.26e-15!21;UBERON:0005564!6.26e-15!21;UBERON:0004176!2.99e-14!22;UBERON:0003101!2.19e-09!22;UBERON:0000079!2.19e-09!22;UBERON:0002323!9.01e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.08e-28;8!UBERON:0003135;5.53e-21;11!UBERON:0000991;5.40e-17;21!UBERON:0003101;1.18e-10;22!UBERON:0000079;1.18e-10;22!UBERON:0000922;3.31e-10;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.05e-28,8;UBERON:0003135,5.39e-21,11;UBERON:0000991,5.32e-17,21;UBERON:0009196,5.32e-17,21;UBERON:0009117,5.32e-17,21;UBERON:0005564,5.32e-17,21;UBERON:0004176,3.13e-16,22;UBERON:0003101,1.17e-10,22;UBERON:0000079,1.17e-10,22;UBERON:0002323,9.42e-08,46;UBERON:0003133,2.00e-07,48;UBERON:0004458,2.84e-07,49 | |||
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|short_description=p@chr12:11762229..11762247,+ | |short_description=p@chr12:11762229..11762247,+ | ||
}} | }} |
Latest revision as of 05:27, 24 July 2015
Short description: | p@chr12:11762229..11762247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:11762229..11762247, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.58e-45 | 5 |
germ line cell | 9.69e-33 | 7 |
germ cell | 9.69e-33 | 7 |
neuron | 2.28e-22 | 6 |
neuroblast | 2.28e-22 | 6 |
electrically signaling cell | 2.28e-22 | 6 |
neuronal stem cell | 5.98e-17 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.05e-28 | 8 |
male reproductive organ | 5.39e-21 | 11 |
gonad | 5.32e-17 | 21 |
indifferent external genitalia | 5.32e-17 | 21 |
indifferent gonad | 5.32e-17 | 21 |
gonad primordium | 5.32e-17 | 21 |
external genitalia | 3.13e-16 | 22 |
male organism | 1.17e-10 | 22 |
male reproductive system | 1.17e-10 | 22 |
body cavity | 9.42e-08 | 46 |
reproductive organ | 2.00e-07 | 48 |
body cavity or lining | 2.84e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.44e-23 | 22 |
germ cell cancer | 5.44e-23 | 22 |