FFCP PHASE1:Hg19::chr12:9602384..9602388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9602384..9602388,- | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_at_chr12:9602384..9602388,- | |description=CAGE_peak_at_chr12:9602384..9602388,- | ||
|id=chr12:9602384..9602388,- | |id=chr12:9602384..9602388,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;3.23e-22;3!CL:0000764;2.07e-15;2!CL:0000558;2.07e-15;2!CL:0000097;1.03e-14;5!CL:0000163;2.18e-08;9!CL:0000148;4.86e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.18e-22,3;CL:0000764,3.00e-15,2;CL:0000765,3.00e-15,2;CL:0000050,3.00e-15,2;CL:0000038,3.00e-15,2;CL:0000558,3.00e-15,2;CL:0000547,3.00e-15,2;CL:0000549,3.00e-15,2;CL:0000550,3.00e-15,2;CL:0000552,3.00e-15,2;CL:0000097,1.03e-14,5;CL:0002028,1.03e-14,5;CL:0000163,2.18e-08,9;CL:0000148,5.23e-07,10;CL:0000541,5.23e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.58e-07!239 | |ontology_enrichment_disease=DOID:14566!6.58e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4556;9.58e-11;3!DOID:9119;4.02e-09;1!DOID:8692;8.02e-08;31!DOID:3908;8.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,8.47e-11,3;DOID:9119,3.87e-09,1;DOID:8692,2.79e-08,31;DOID:3908,8.17e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000344!6.99e-07!12 | |ontology_enrichment_uberon=UBERON:0000344!6.99e-07!12 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:9602384..9602388,- | |short_description=p@chr12:9602384..9602388,- | ||
}} | }} |
Latest revision as of 13:50, 24 July 2015
Short description: | p@chr12:9602384..9602388, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9602384..9602388, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.18e-22 | 3 |
erythroid lineage cell | 3.00e-15 | 2 |
erythroblast | 3.00e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 3.00e-15 | 2 |
erythroid progenitor cell | 3.00e-15 | 2 |
reticulocyte | 3.00e-15 | 2 |
proerythroblast | 3.00e-15 | 2 |
basophilic erythroblast | 3.00e-15 | 2 |
polychromatophilic erythroblast | 3.00e-15 | 2 |
orthochromatic erythroblast | 3.00e-15 | 2 |
mast cell | 1.03e-14 | 5 |
basophil mast progenitor cell | 1.03e-14 | 5 |
endocrine cell | 2.18e-08 | 9 |
melanocyte | 5.23e-07 | 10 |
melanoblast | 5.23e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 8.47e-11 | 3 |
acute myeloid leukemia | 3.87e-09 | 1 |
myeloid leukemia | 2.79e-08 | 31 |
non-small cell lung carcinoma | 8.17e-07 | 5 |