FFCP PHASE1:Hg19::chr14:94844828..94844834,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=51bp_to_M26123_5end | |association_with_transcript=51bp_to_M26123_5end | ||
|cluster_id=chr14:94844828..94844834,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_34_at_SERPINA1_5end | |description=CAGE_peak_34_at_SERPINA1_5end | ||
|id=chr14:94844828..94844834,- | |id=chr14:94844828..94844834,- | ||
|ontology_enrichment_celltype=CL:0000181!6.83e-16!12;CL:0000417!6.83e-16!12;CL:0000668!6.83e-16!12;CL:0000414!6.83e-16!12;CL:0000412!6.83e-16!12;CL:0000182!6.83e-16!12;CL:0002057!2.59e-13!42;CL:0000860!2.77e-12!45;CL:0002194!2.35e-11!63;CL:0000576!2.35e-11!63;CL:0000040!2.35e-11!63;CL:0000559!2.35e-11!63;CL:0002009!6.24e-11!65;CL:0000766!1.57e-10!76;CL:0000839!5.61e-10!70;CL:0000557!8.39e-10!71;CL:0000763!2.43e-07!112;CL:0000049!2.43e-07!112 | |ontology_enrichment_celltype=CL:0000181!6.83e-16!12;CL:0000417!6.83e-16!12;CL:0000668!6.83e-16!12;CL:0000414!6.83e-16!12;CL:0000412!6.83e-16!12;CL:0000182!6.83e-16!12;CL:0002057!2.59e-13!42;CL:0000860!2.77e-12!45;CL:0002194!2.35e-11!63;CL:0000576!2.35e-11!63;CL:0000040!2.35e-11!63;CL:0000559!2.35e-11!63;CL:0002009!6.24e-11!65;CL:0000766!1.57e-10!76;CL:0000839!5.61e-10!70;CL:0000557!8.39e-10!71;CL:0000763!2.43e-07!112;CL:0000049!2.43e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.66e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.66e-25,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.10e-13;11!UBERON:0009497;3.56e-11;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!1.43e-18!22;UBERON:0003894!1.43e-18!22;UBERON:0009854!1.08e-17!23;UBERON:0002107!2.14e-17!19;UBERON:0006925!2.14e-17!19;UBERON:0008836!2.14e-17!19;UBERON:0007499!3.74e-16!25;UBERON:0009497!3.74e-16!25;UBERON:0000015!3.74e-16!25;UBERON:0002423!3.74e-16!25;UBERON:0006235!3.74e-16!25;UBERON:0004161!3.74e-16!25;UBERON:0002405!8.29e-16!115;UBERON:0009856!1.79e-15!26;UBERON:0002365!1.02e-12!31;UBERON:0002330!1.02e-12!31;UBERON:0005057!2.26e-12!26;UBERON:0003929!5.31e-10!54;UBERON:0002368!7.24e-09!35;UBERON:0002371!1.99e-08!80;UBERON:0002390!2.05e-08!102;UBERON:0003061!2.05e-08!102;UBERON:0001474!1.13e-07!86;UBERON:0002193!2.11e-07!112;UBERON:0002530!2.18e-07!59 | |ontology_enrichment_uberon=UBERON:0008835!1.43e-18!22;UBERON:0003894!1.43e-18!22;UBERON:0009854!1.08e-17!23;UBERON:0002107!2.14e-17!19;UBERON:0006925!2.14e-17!19;UBERON:0008836!2.14e-17!19;UBERON:0007499!3.74e-16!25;UBERON:0009497!3.74e-16!25;UBERON:0000015!3.74e-16!25;UBERON:0002423!3.74e-16!25;UBERON:0006235!3.74e-16!25;UBERON:0004161!3.74e-16!25;UBERON:0002405!8.29e-16!115;UBERON:0009856!1.79e-15!26;UBERON:0002365!1.02e-12!31;UBERON:0002330!1.02e-12!31;UBERON:0005057!2.26e-12!26;UBERON:0003929!5.31e-10!54;UBERON:0002368!7.24e-09!35;UBERON:0002371!1.99e-08!80;UBERON:0002390!2.05e-08!102;UBERON:0003061!2.05e-08!102;UBERON:0001474!1.13e-07!86;UBERON:0002193!2.11e-07!112;UBERON:0002530!2.18e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.21e-43;19!UBERON:0006925;1.21e-43;19!UBERON:0002423;2.39e-33;25!UBERON:0002365;6.15e-27;31!UBERON:0002330;6.15e-27;31!UBERON:0002368;2.93e-23;33!UBERON:0000949;7.97e-17;43!UBERON:0005172;4.32e-12;52!UBERON:0005173;4.32e-12;52!UBERON:0002417;2.56e-09;58!UBERON:0000916;2.56e-09;58!UBERON:0002530;8.95e-09;57!UBERON:0001007;1.23e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.21e-43,19;UBERON:0006925,1.21e-43,19;UBERON:0008836,1.21e-43,19;UBERON:0008835,8.52e-38,22;UBERON:0003894,8.52e-38,22;UBERON:0009854,3.48e-36,23;UBERON:0007499,2.39e-33,25;UBERON:0009497,2.39e-33,25;UBERON:0000015,2.39e-33,25;UBERON:0002423,2.39e-33,25;UBERON:0006235,2.39e-33,25;UBERON:0004161,2.39e-33,25;UBERON:0009856,4.31e-32,26;UBERON:0002365,5.02e-27,31;UBERON:0002330,5.02e-27,31;UBERON:0002368,5.19e-24,35;UBERON:0000949,8.25e-19,45;UBERON:0003929,9.10e-16,54;UBERON:0005172,9.10e-16,54;UBERON:0005173,9.10e-16,54;UBERON:0002530,1.78e-14,59;UBERON:0002417,3.05e-14,60;UBERON:0000916,3.05e-14,60;UBERON:0005911,1.51e-10,82;UBERON:0001041,5.77e-10,87;UBERON:0005177,1.22e-08,101;UBERON:0009569,7.95e-08,112;UBERON:0003914,1.66e-07,117;UBERON:0004921,2.19e-07,118;UBERON:0005256,3.27e-07,122 | |||
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|short_description=p34@SERPINA1 | |short_description=p34@SERPINA1 | ||
}} | }} |
Latest revision as of 17:41, 16 September 2015
Short description: | p34@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 51bp_to_M26123_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.66e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.21e-43 | 19 |
digestive gland | 1.21e-43 | 19 |
liver bud | 1.21e-43 | 19 |
hepatic diverticulum | 8.52e-38 | 22 |
liver primordium | 8.52e-38 | 22 |
digestive tract diverticulum | 3.48e-36 | 23 |
epithelial sac | 2.39e-33 | 25 |
epithelium of foregut-midgut junction | 2.39e-33 | 25 |
anatomical boundary | 2.39e-33 | 25 |
hepatobiliary system | 2.39e-33 | 25 |
foregut-midgut junction | 2.39e-33 | 25 |
septum transversum | 2.39e-33 | 25 |
sac | 4.31e-32 | 26 |
exocrine gland | 5.02e-27 | 31 |
exocrine system | 5.02e-27 | 31 |
endocrine gland | 5.19e-24 | 35 |
endocrine system | 8.25e-19 | 45 |
gut epithelium | 9.10e-16 | 54 |
abdomen element | 9.10e-16 | 54 |
abdominal segment element | 9.10e-16 | 54 |
gland | 1.78e-14 | 59 |
abdominal segment of trunk | 3.05e-14 | 60 |
abdomen | 3.05e-14 | 60 |
endo-epithelium | 1.51e-10 | 82 |
foregut | 5.77e-10 | 87 |
trunk region element | 1.22e-08 | 101 |
subdivision of trunk | 7.95e-08 | 112 |
epithelial tube | 1.66e-07 | 117 |
subdivision of digestive tract | 2.19e-07 | 118 |
trunk mesenchyme | 3.27e-07 | 122 |