FFCP PHASE1:Hg19::chr14:94845907..94845919,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=C1KH65 | |UniProt=C1KH65 | ||
|association_with_transcript=28bp_to_FJ830375_5end | |association_with_transcript=28bp_to_FJ830375_5end | ||
|cluster_id=chr14:94845907..94845919,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_33_at_SERPINA1_5end | |description=CAGE_peak_33_at_SERPINA1_5end | ||
|id=chr14:94845907..94845919,- | |id=chr14:94845907..94845919,- | ||
|ontology_enrichment_celltype=CL:0002057!3.02e-22!42;CL:0000860!1.85e-20!45;CL:0000766!6.44e-18!76;CL:0002194!1.69e-16!63;CL:0000576!1.69e-16!63;CL:0000040!1.69e-16!63;CL:0000559!1.69e-16!63;CL:0002009!7.56e-16!65;CL:0000181!1.37e-14!12;CL:0000417!1.37e-14!12;CL:0000668!1.37e-14!12;CL:0000414!1.37e-14!12;CL:0000412!1.37e-14!12;CL:0000182!1.37e-14!12;CL:0000839!2.20e-14!70;CL:0000557!4.07e-14!71;CL:0000763!1.57e-11!112;CL:0000049!1.57e-11!112;CL:0000738!4.34e-10!140;CL:0002087!1.79e-09!119;CL:0002031!6.26e-08!124;CL:0000037!7.04e-08!172;CL:0000566!7.04e-08!172;CL:0002032!1.22e-07!165;CL:0000837!1.22e-07!165;CL:0000988!4.04e-07!182 | |ontology_enrichment_celltype=CL:0002057!3.02e-22!42;CL:0000860!1.85e-20!45;CL:0000766!6.44e-18!76;CL:0002194!1.69e-16!63;CL:0000576!1.69e-16!63;CL:0000040!1.69e-16!63;CL:0000559!1.69e-16!63;CL:0002009!7.56e-16!65;CL:0000181!1.37e-14!12;CL:0000417!1.37e-14!12;CL:0000668!1.37e-14!12;CL:0000414!1.37e-14!12;CL:0000412!1.37e-14!12;CL:0000182!1.37e-14!12;CL:0000839!2.20e-14!70;CL:0000557!4.07e-14!71;CL:0000763!1.57e-11!112;CL:0000049!1.57e-11!112;CL:0000738!4.34e-10!140;CL:0002087!1.79e-09!119;CL:0002031!6.26e-08!124;CL:0000037!7.04e-08!172;CL:0000566!7.04e-08!172;CL:0002032!1.22e-07!165;CL:0000837!1.22e-07!165;CL:0000988!4.04e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.00e-22;3!CL:0000182;1.17e-22;12!CL:0000094;3.86e-09;8!CL:0000081;6.94e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,8.99e-23,3;CL:0000182,1.23e-22,12;CL:0000094,3.70e-09,8;CL:0000081,6.74e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.08e-14;11!UBERON:0009497;3.81e-12;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.92e-31;19!UBERON:0006925;1.92e-31;19!UBERON:0002423;6.85e-24;25!UBERON:0002365;2.60e-19;31!UBERON:0002330;2.60e-19;31!UBERON:0002368;1.05e-16;33!UBERON:0000949;1.01e-11;43!UBERON:0005172;1.33e-08;52!UBERON:0005173;1.33e-08;52!UBERON:0002417;3.30e-07;58!UBERON:0000916;3.30e-07;58 | |||
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| ||
|short_description=p33@SERPINA1 | |short_description=p33@SERPINA1 | ||
}} | }} |
Latest revision as of 17:52, 16 September 2015
Short description: | p33@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 28bp_to_FJ830375_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | C1KH65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 8.99e-23 | 3 |
hepatocyte | 1.23e-22 | 12 |
granulocyte | 3.70e-09 | 8 |
blood cell | 6.74e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
liver | 2.03e-31 | 19 |
digestive gland | 2.03e-31 | 19 |
liver bud | 2.03e-31 | 19 |
hepatic diverticulum | 3.92e-27 | 22 |
liver primordium | 3.92e-27 | 22 |
digestive tract diverticulum | 5.94e-26 | 23 |
epithelial sac | 7.13e-24 | 25 |
epithelium of foregut-midgut junction | 7.13e-24 | 25 |
anatomical boundary | 7.13e-24 | 25 |
hepatobiliary system | 7.13e-24 | 25 |
foregut-midgut junction | 7.13e-24 | 25 |
septum transversum | 7.13e-24 | 25 |
sac | 5.94e-23 | 26 |
exocrine gland | 3.08e-19 | 31 |
exocrine system | 3.08e-19 | 31 |
endocrine gland | 5.00e-17 | 35 |
endocrine system | 3.27e-13 | 45 |
gut epithelium | 5.60e-11 | 54 |
abdomen element | 5.60e-11 | 54 |
abdominal segment element | 5.60e-11 | 54 |
gland | 4.97e-10 | 59 |
abdominal segment of trunk | 7.37e-10 | 60 |
abdomen | 7.37e-10 | 60 |
foregut | 5.49e-09 | 87 |
endo-epithelium | 3.81e-07 | 82 |