FFCP PHASE1:Hg19::chr18:30716038..30716056,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:30716038..30716056,-
|short_description=p1@C18orf34
|description=CAGE_peak_1_at_C18orf34_5end
|association_with_transcript=0bp_to_uc010xbq.1_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=374864 | |EntrezGene=374864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29588 | |HGNC=29588 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010xbq.1_5end | |||
|cluster_id=chr18:30716038..30716056,- | |||
|coexpression_cluster_id=C3716 | |||
|description=CAGE_peak_1_at_C18orf34_5end | |||
|id=chr18:30716038..30716056,- | |||
|ontology_enrichment_celltype=CL:0002139!2.14e-15!24;CL:0000115!5.15e-11!35;CL:0005020!1.04e-09!6;CL:0002138!1.04e-09!6;CL:0005022!1.04e-09!6;CL:0002543!1.32e-09!6;CL:0000071!1.47e-08!18;CL:0002546!1.47e-08!18;CL:0002078!5.27e-08!44;CL:0002618!1.59e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.22e-10;6!CL:0002139;3.03e-09;24!CL:0000136;7.61e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.23e-10,6;CL:0002138,1.23e-10,6;CL:0005022,1.23e-10,6;CL:0002139,2.86e-09,24;CL:0000136,8.31e-07,15 | |||
|ontology_enrichment_development_v019=CL:0005022;1.22e-10;6!UBERON:0004872;7.07e-09;7!UBERON:0006603;1.62e-07;65!UBERON:0009143;1.85e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-25!115;UBERON:0002465!3.69e-10!10;UBERON:0001638!6.26e-09!9;UBERON:0003920!6.26e-09!9;UBERON:0004582!6.26e-09!9;UBERON:0000055!9.60e-09!69;UBERON:0001986!1.47e-08!18;UBERON:0004638!1.47e-08!18;UBERON:0004852!1.47e-08!18;UBERON:0004872!1.01e-07!84;UBERON:0001473!3.69e-07!8;UBERON:0004536!3.69e-07!8;UBERON:0006558!3.69e-07!8;UBERON:0002049!5.32e-07!79;UBERON:0007798!5.32e-07!79;UBERON:0001009!5.42e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.23e-09;3!UBERON:0006947;4.00e-09;3!UBERON:0004054;4.00e-09;3!UBERON:0001473;4.37e-08;8!UBERON:0004536;4.37e-08;8!UBERON:0006558;4.37e-08;8!UBERON:0007029;1.85e-07;1!UBERON:0006834;1.85e-07;1!UBERON:0001000;1.85e-07;1!UBERON:0000996;1.85e-07;1!UBERON:0001301;1.85e-07;1!UBERON:0005352;1.85e-07;1!UBERON:0004175;3.39e-07;21!UBERON:0005904;4.75e-07;4!UBERON:0001638;7.65e-07;9!UBERON:0003920;7.65e-07;9!UBERON:0004582;7.65e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.06e-12,114;UBERON:0002106,1.23e-09,3;UBERON:0004854,1.23e-09,3;UBERON:0009034,1.23e-09,3;UBERON:0002095,1.23e-09,3;UBERON:0004782,1.23e-09,3;UBERON:0003281,1.23e-09,3;UBERON:0009664,1.23e-09,3;UBERON:0002296,1.23e-09,3;UBERON:0005602,1.23e-09,3;UBERON:0001179,1.23e-09,3;UBERON:0006293,1.23e-09,3;UBERON:0006947,2.87e-09,3;UBERON:0004054,2.87e-09,3;UBERON:0001473,4.38e-08,8;UBERON:0004536,4.38e-08,8;UBERON:0006558,4.38e-08,8;UBERON:0000996,1.07e-07,1;UBERON:0000945,1.25e-07,8;UBERON:0010039,1.25e-07,8;UBERON:0001000,1.39e-07,1;UBERON:0005352,1.39e-07,1;UBERON:0001301,1.48e-07,1;UBERON:0007029,1.91e-07,1;UBERON:0006834,2.31e-07,1;UBERON:0005904,3.71e-07,4;UBERON:0001638,7.28e-07,9;UBERON:0003920,7.28e-07,9;UBERON:0004582,7.28e-07,9 | |||
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| ||
|short_description=p1@C18orf34 | |||
}} | }} |
Latest revision as of 06:48, 19 September 2015
Short description: | p1@C18orf34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C18orf34_5end |
Coexpression cluster: | C3716_Endothelial_adipose_breast_small_diaphragm_embryonic_skin |
Association with transcript: | 0bp_to_uc010xbq.1_5end |
EntrezGene: | C18orf34 |
HGNC: | 29588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.23e-10 | 6 |
endothelial cell of lymphatic vessel | 1.23e-10 | 6 |
vascular lymphangioblast | 1.23e-10 | 6 |
endothelial cell of vascular tree | 2.86e-09 | 24 |
fat cell | 8.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.06e-12 | 114 |
spleen | 1.23e-09 | 3 |
gastrointestinal system mesentery | 1.23e-09 | 3 |
stomach region | 1.23e-09 | 3 |
mesentery | 1.23e-09 | 3 |
gastrointestinal system serosa | 1.23e-09 | 3 |
mesentery of stomach | 1.23e-09 | 3 |
gut mesentery | 1.23e-09 | 3 |
dorsal mesentery | 1.23e-09 | 3 |
dorsal mesogastrium | 1.23e-09 | 3 |
peritoneal cavity | 1.23e-09 | 3 |
spleen primordium | 1.23e-09 | 3 |
male genital duct | 2.87e-09 | 3 |
internal male genitalia | 2.87e-09 | 3 |
lymphatic vessel | 4.38e-08 | 8 |
lymph vasculature | 4.38e-08 | 8 |
lymphatic part of lymphoid system | 4.38e-08 | 8 |
vagina | 1.07e-07 | 1 |
stomach | 1.25e-07 | 8 |
food storage organ | 1.25e-07 | 8 |
vas deferens | 1.39e-07 | 1 |
spermatic cord | 1.39e-07 | 1 |
epididymis | 1.48e-07 | 1 |
surface | 1.91e-07 | 1 |
uterus or analog | 2.31e-07 | 1 |
duct of male reproductive system | 3.71e-07 | 4 |
vein | 7.28e-07 | 9 |
venous blood vessel | 7.28e-07 | 9 |
venous system | 7.28e-07 | 9 |