FFCP PHASE1:Hg19::chr16:4431722..4431771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:4431722..4431771,+ | |||
|coexpression_cluster_id=C1421 | |coexpression_cluster_id=C1421 | ||
|description=CAGE_peak_at_chr16:4431722..4431771,+ | |description=CAGE_peak_at_chr16:4431722..4431771,+ | ||
|id=chr16:4431722..4431771,+ | |id=chr16:4431722..4431771,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.23e-27!180;CL:0000057!3.04e-21!75;CL:0000183!9.69e-10!59;CL:0002334!1.38e-09!12;CL:0000680!2.68e-09!57;CL:0000056!2.68e-09!57;CL:0000355!2.68e-09!57;CL:0002620!8.10e-09!23;CL:0000187!1.29e-08!54;CL:0000499!3.95e-08!27;CL:0000393!6.28e-07!60;CL:0000211!6.28e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.23e-27!180;CL:0000057!3.04e-21!75;CL:0000183!9.69e-10!59;CL:0002334!1.38e-09!12;CL:0000680!2.68e-09!57;CL:0000056!2.68e-09!57;CL:0000355!2.68e-09!57;CL:0002620!8.10e-09!23;CL:0000187!1.29e-08!54;CL:0000499!3.95e-08!27;CL:0000393!6.28e-07!60;CL:0000211!6.28e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.85e-18;12!CL:0002620;3.68e-13;23!CL:0000499;1.89e-09;28!CL:0000057;2.83e-09;73!CL:0002320;4.52e-09;188!CL:0000136;4.90e-09;13!CL:0000134;9.62e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.54e-25,76;CL:0002334,4.52e-18,12;CL:0000048,1.31e-16,427;CL:0000723,5.51e-16,433;CL:0000034,3.49e-15,441;CL:0002320,5.37e-15,361;CL:0000134,1.83e-13,354;CL:0002620,3.76e-13,23;CL:0000136,2.00e-11,15;CL:0000219,2.84e-10,386;CL:0000499,1.17e-09,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.98e-12!143;UBERON:0000475!3.03e-12!365;UBERON:0000914!2.62e-11!83;UBERON:0002329!2.62e-11!83;UBERON:0003077!2.62e-11!83;UBERON:0003059!2.62e-11!83;UBERON:0007282!2.62e-11!83;UBERON:0009618!2.62e-11!83;UBERON:0007285!2.62e-11!83;UBERON:0002100!5.71e-11!216;UBERON:0003102!9.12e-11!95;UBERON:0004290!7.08e-10!70;UBERON:0001134!8.59e-10!61;UBERON:0002036!8.59e-10!61;UBERON:0003082!8.59e-10!61;UBERON:0002385!2.09e-09!63;UBERON:0001015!2.09e-09!63;UBERON:0000383!2.09e-09!63;UBERON:0004923!5.33e-09!57;UBERON:0002199!3.89e-08!45;UBERON:0002416!3.89e-08!45;UBERON:0000486!7.05e-08!82;UBERON:0003104!3.20e-07!238;UBERON:0009142!3.20e-07!238 | |ontology_enrichment_uberon=UBERON:0005256!1.98e-12!143;UBERON:0000475!3.03e-12!365;UBERON:0000914!2.62e-11!83;UBERON:0002329!2.62e-11!83;UBERON:0003077!2.62e-11!83;UBERON:0003059!2.62e-11!83;UBERON:0007282!2.62e-11!83;UBERON:0009618!2.62e-11!83;UBERON:0007285!2.62e-11!83;UBERON:0002100!5.71e-11!216;UBERON:0003102!9.12e-11!95;UBERON:0004290!7.08e-10!70;UBERON:0001134!8.59e-10!61;UBERON:0002036!8.59e-10!61;UBERON:0003082!8.59e-10!61;UBERON:0002385!2.09e-09!63;UBERON:0001015!2.09e-09!63;UBERON:0000383!2.09e-09!63;UBERON:0004923!5.33e-09!57;UBERON:0002199!3.89e-08!45;UBERON:0002416!3.89e-08!45;UBERON:0000486!7.05e-08!82;UBERON:0003104!3.20e-07!238;UBERON:0009142!3.20e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.12e-12;9!UBERON:0000042;7.12e-12;9!UBERON:0001013;7.48e-12;14!UBERON:0003688;1.85e-10;6!UBERON:0002358;1.85e-10;6!UBERON:0003684;1.85e-10;6!UBERON:0001178;1.85e-10;6!UBERON:0002384;1.49e-08;198!UBERON:0002072;1.57e-08;5!UBERON:0002199;1.85e-08;46!UBERON:0002416;1.85e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.22e-15,371;UBERON:0002199,4.57e-13,46;UBERON:0002416,4.57e-13,46;UBERON:0001013,7.25e-12,14;UBERON:0003688,2.45e-10,6;UBERON:0002358,2.45e-10,6;UBERON:0003684,2.45e-10,6;UBERON:0001178,2.45e-10,6;UBERON:0003102,1.06e-09,99;UBERON:0002097,1.32e-08,41;UBERON:0002072,1.43e-08,5;UBERON:0004457,2.29e-08,12;UBERON:0000042,2.29e-08,12;UBERON:0004923,4.68e-07,66 | |||
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| ||
|short_description=p@chr16:4431722..4431771,+ | |short_description=p@chr16:4431722..4431771,+ | ||
}} | }} |
Latest revision as of 08:50, 25 July 2015
Short description: | p@chr16:4431722..4431771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:4431722..4431771, + |
Coexpression cluster: | C1421_Mesenchymal_Preadipocyte_Fibroblast_tenocyte_Adipocyte_Osteoblast_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.54e-25 | 76 |
preadipocyte | 4.52e-18 | 12 |
multi fate stem cell | 1.31e-16 | 427 |
somatic stem cell | 5.51e-16 | 433 |
stem cell | 3.49e-15 | 441 |
connective tissue cell | 5.37e-15 | 361 |
mesenchymal cell | 1.83e-13 | 354 |
skin fibroblast | 3.76e-13 | 23 |
fat cell | 2.00e-11 | 15 |
motile cell | 2.84e-10 | 386 |
stromal cell | 1.17e-09 | 28 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.22e-15 | 371 |
integument | 4.57e-13 | 46 |
integumental system | 4.57e-13 | 46 |
adipose tissue | 7.25e-12 | 14 |
omentum | 2.45e-10 | 6 |
peritoneum | 2.45e-10 | 6 |
abdominal cavity | 2.45e-10 | 6 |
visceral peritoneum | 2.45e-10 | 6 |
surface structure | 1.06e-09 | 99 |
skin of body | 1.32e-08 | 41 |
hypodermis | 1.43e-08 | 5 |
cavity lining | 2.29e-08 | 12 |
serous membrane | 2.29e-08 | 12 |
organ component layer | 4.68e-07 | 66 |