FFCP PHASE1:Hg19::chr16:75301886..75301914,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9564 | |EntrezGene=9564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=971 | |HGNC=971 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCV2,B3KWD7,P56945 | |UniProt=E9PCV2,B3KWD7,P56945 | ||
|association_with_transcript=36bp_to_ENST00000393422,NM_001170715,uc002fdx.2_5end | |association_with_transcript=36bp_to_ENST00000393422,NM_001170715,uc002fdx.2_5end | ||
|cluster_id=chr16:75301886..75301914,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_8_at_BCAR1_5end | |description=CAGE_peak_8_at_BCAR1_5end | ||
|id=chr16:75301886..75301914,- | |id=chr16:75301886..75301914,- | ||
|ontology_enrichment_celltype=CL:0000066!9.03e-37!254;CL:0002076!7.59e-17!43;CL:0000223!7.11e-14!59;CL:0002368!7.41e-12!13;CL:0000076!2.53e-11!62;CL:0002202!7.50e-09!9;CL:0002632!7.50e-09!9;CL:0002159!9.01e-09!13;CL:0000220!3.49e-08!246;CL:0002321!6.32e-08!248;CL:0000082!1.03e-07!19;CL:1000497!3.04e-07!18;CL:0002518!3.04e-07!18;CL:1000449!4.21e-07!16;CL:0000240!4.84e-07!6;CL:0000311!4.84e-07!6;CL:0000079!4.84e-07!6;CL:0000237!4.84e-07!6;CL:0000036!4.84e-07!6;CL:0000357!4.84e-07!6;CL:0000114!4.84e-07!6;CL:0002681!6.75e-07!13;CL:0002584!6.75e-07!13 | |ontology_enrichment_celltype=CL:0000066!9.03e-37!254;CL:0002076!7.59e-17!43;CL:0000223!7.11e-14!59;CL:0002368!7.41e-12!13;CL:0000076!2.53e-11!62;CL:0002202!7.50e-09!9;CL:0002632!7.50e-09!9;CL:0002159!9.01e-09!13;CL:0000220!3.49e-08!246;CL:0002321!6.32e-08!248;CL:0000082!1.03e-07!19;CL:1000497!3.04e-07!18;CL:0002518!3.04e-07!18;CL:1000449!4.21e-07!16;CL:0000240!4.84e-07!6;CL:0000311!4.84e-07!6;CL:0000079!4.84e-07!6;CL:0000237!4.84e-07!6;CL:0000036!4.84e-07!6;CL:0000357!4.84e-07!6;CL:0000114!4.84e-07!6;CL:0002681!6.75e-07!13;CL:0002584!6.75e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002368;8.45e-18;13!CL:0002076;1.13e-17;42!CL:0002159;2.88e-14;14!CL:0002202;3.39e-13;9!CL:0002632;3.39e-13;9!CL:0000240;4.52e-12;6!CL:0000311;4.52e-12;6!CL:0000079;4.52e-12;6!CL:0000237;4.52e-12;6!CL:0000312;1.57e-09;5!CL:0002621;6.09e-09;3!CL:0000307;1.24e-08;3!CL:0002328;2.35e-08;3!CL:0000362;8.08e-08;9!CL:0002077;1.95e-07;34!CL:0002251;2.80e-07;20!CL:0002681;9.40e-07;12!CL:0002584;9.40e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.93e-23,253;CL:0002076,1.24e-21,42;CL:0002368,9.05e-18,13;CL:0000223,1.40e-15,58;CL:0002159,2.02e-14,14;CL:0002202,3.20e-13,9;CL:0002632,3.20e-13,9;CL:0002321,3.81e-12,250;CL:0000240,4.66e-12,6;CL:0000311,4.66e-12,6;CL:0000079,4.66e-12,6;CL:0000237,4.66e-12,6;CL:0000036,4.66e-12,6;CL:0000357,4.66e-12,6;CL:0000114,4.66e-12,6;CL:0000312,1.61e-09,5;CL:0002621,6.81e-09,3;CL:0002077,9.39e-09,34;CL:0002328,1.24e-08,3;CL:0000068,1.83e-08,3;CL:0000069,1.83e-08,3;CL:0000307,1.83e-08,3;CL:0000377,1.83e-08,3;CL:0000076,3.06e-08,63;CL:0000362,8.06e-08,9;CL:0002251,3.04e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;4.52e-12;6!CL:0000114;4.52e-12;6!CL:0000223;1.93e-09;58!CL:0000377;1.24e-08;3 | |||
|ontology_enrichment_disease=DOID:305!9.05e-13!106;DOID:0050687!4.40e-09!143 | |ontology_enrichment_disease=DOID:305!9.05e-13!106;DOID:0050687!4.40e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.33e-12!169;UBERON:0000925!1.33e-12!169;UBERON:0006595!1.33e-12!169;UBERON:0000464!1.00e-11!104;UBERON:0005177!3.48e-11!107;UBERON:0000466!3.58e-10!126;UBERON:0000475!3.74e-10!365;UBERON:0005157!5.85e-10!51;UBERON:0006554!2.38e-09!44;UBERON:0005153!2.42e-09!37;UBERON:0001007!4.02e-09!155;UBERON:0001555!4.02e-09!155;UBERON:0007026!4.02e-09!155;UBERON:0001004!5.28e-09!72;UBERON:0001008!6.11e-09!45;UBERON:0000062!6.85e-09!511;UBERON:0000481!8.66e-09!347;UBERON:0000467!1.56e-08!625;UBERON:0000480!1.96e-08!626;UBERON:0005178!3.47e-08!34;UBERON:0002224!3.47e-08!34;UBERON:0004921!3.96e-08!129;UBERON:0004185!3.96e-08!129;UBERON:0001041!4.91e-08!98;UBERON:0000483!6.91e-08!309;UBERON:0000923!7.62e-08!604;UBERON:0005291!7.62e-08!604;UBERON:0006598!7.62e-08!604;UBERON:0002532!7.62e-08!604;UBERON:0009569!9.28e-08!113;UBERON:0005181!9.48e-08!35;UBERON:0002050!9.50e-08!605;UBERON:0005423!9.50e-08!605;UBERON:0004802!1.03e-07!19;UBERON:0000115!1.03e-07!19;UBERON:0000064!1.19e-07!219;UBERON:0000468!1.23e-07!659;UBERON:0001851!1.27e-07!16;UBERON:0000119!1.50e-07!312;UBERON:0000065!2.10e-07!53;UBERON:0000077!2.24e-07!130;UBERON:0004807!2.38e-07!28;UBERON:0004121!3.47e-07!169;UBERON:0004211!4.21e-07!16;UBERON:0001285!4.21e-07!16;UBERON:0007684!4.21e-07!16;UBERON:0003220!4.21e-07!16;UBERON:0004208!4.21e-07!16;UBERON:0000922!4.24e-07!612;UBERON:0000924!6.05e-07!173;UBERON:0006601!6.05e-07!173;UBERON:0001225!6.75e-07!13;UBERON:0008987!6.75e-07!13;UBERON:0002113!6.79e-07!27;UBERON:0003918!6.79e-07!27;UBERON:0005095!6.79e-07!27;UBERON:0007687!6.79e-07!27;UBERON:0004111!7.42e-07!241;UBERON:0002048!9.17e-07!22;UBERON:0000117!9.17e-07!22;UBERON:0000171!9.17e-07!22;UBERON:0000170!9.17e-07!22;UBERON:0005597!9.17e-07!22;UBERON:0000118!9.17e-07!22;UBERON:0007196!9.30e-07!14;UBERON:0001558!9.30e-07!14;UBERON:0000058!9.48e-07!26 | |ontology_enrichment_uberon=UBERON:0004119!1.33e-12!169;UBERON:0000925!1.33e-12!169;UBERON:0006595!1.33e-12!169;UBERON:0000464!1.00e-11!104;UBERON:0005177!3.48e-11!107;UBERON:0000466!3.58e-10!126;UBERON:0000475!3.74e-10!365;UBERON:0005157!5.85e-10!51;UBERON:0006554!2.38e-09!44;UBERON:0005153!2.42e-09!37;UBERON:0001007!4.02e-09!155;UBERON:0001555!4.02e-09!155;UBERON:0007026!4.02e-09!155;UBERON:0001004!5.28e-09!72;UBERON:0001008!6.11e-09!45;UBERON:0000062!6.85e-09!511;UBERON:0000481!8.66e-09!347;UBERON:0000467!1.56e-08!625;UBERON:0000480!1.96e-08!626;UBERON:0005178!3.47e-08!34;UBERON:0002224!3.47e-08!34;UBERON:0004921!3.96e-08!129;UBERON:0004185!3.96e-08!129;UBERON:0001041!4.91e-08!98;UBERON:0000483!6.91e-08!309;UBERON:0000923!7.62e-08!604;UBERON:0005291!7.62e-08!604;UBERON:0006598!7.62e-08!604;UBERON:0002532!7.62e-08!604;UBERON:0009569!9.28e-08!113;UBERON:0005181!9.48e-08!35;UBERON:0002050!9.50e-08!605;UBERON:0005423!9.50e-08!605;UBERON:0004802!1.03e-07!19;UBERON:0000115!1.03e-07!19;UBERON:0000064!1.19e-07!219;UBERON:0000468!1.23e-07!659;UBERON:0001851!1.27e-07!16;UBERON:0000119!1.50e-07!312;UBERON:0000065!2.10e-07!53;UBERON:0000077!2.24e-07!130;UBERON:0004807!2.38e-07!28;UBERON:0004121!3.47e-07!169;UBERON:0004211!4.21e-07!16;UBERON:0001285!4.21e-07!16;UBERON:0007684!4.21e-07!16;UBERON:0003220!4.21e-07!16;UBERON:0004208!4.21e-07!16;UBERON:0000922!4.24e-07!612;UBERON:0000924!6.05e-07!173;UBERON:0006601!6.05e-07!173;UBERON:0001225!6.75e-07!13;UBERON:0008987!6.75e-07!13;UBERON:0002113!6.79e-07!27;UBERON:0003918!6.79e-07!27;UBERON:0005095!6.79e-07!27;UBERON:0007687!6.79e-07!27;UBERON:0004111!7.42e-07!241;UBERON:0002048!9.17e-07!22;UBERON:0000117!9.17e-07!22;UBERON:0000171!9.17e-07!22;UBERON:0000170!9.17e-07!22;UBERON:0005597!9.17e-07!22;UBERON:0000118!9.17e-07!22;UBERON:0007196!9.30e-07!14;UBERON:0001558!9.30e-07!14;UBERON:0000058!9.48e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.09e-09;3!UBERON:0004815;2.35e-08;3!UBERON:0002031;2.35e-08;3!UBERON:0004807;7.40e-08;22!UBERON:0007196;1.79e-07;15!UBERON:0001558;1.79e-07;15!UBERON:0001851;3.11e-07;15!UBERON:0001905;4.87e-07;2!UBERON:0002757;4.87e-07;2!UBERON:0010134;4.87e-07;2!UBERON:0005408;4.87e-07;2!UBERON:0001899;4.87e-07;2!UBERON:0001225;9.40e-07;12!UBERON:0008987;9.40e-07;12 | |||
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|short_description=p8@BCAR1 | |short_description=p8@BCAR1 | ||
}} | }} |
Latest revision as of 21:33, 17 September 2015
Short description: | p8@BCAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BCAR1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 36bp_to_ENST00000393422, NM_001170715, uc002fdx.2_5end |
EntrezGene: | BCAR1 |
HGNC: | 971 |
UniProt: | E9PCV2B3KWD7P56945 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.93e-23 | 253 |
endo-epithelial cell | 1.24e-21 | 42 |
respiratory epithelial cell | 9.05e-18 | 13 |
endodermal cell | 1.40e-15 | 58 |
general ecto-epithelial cell | 2.02e-14 | 14 |
epithelial cell of tracheobronchial tree | 3.20e-13 | 9 |
epithelial cell of lower respiratory tract | 3.20e-13 | 9 |
embryonic cell | 3.81e-12 | 250 |
stratified squamous epithelial cell | 4.66e-12 | 6 |
keratin accumulating cell | 4.66e-12 | 6 |
stratified epithelial cell | 4.66e-12 | 6 |
keratinizing barrier epithelial cell | 4.66e-12 | 6 |
epithelial fate stem cell | 4.66e-12 | 6 |
stratified epithelial stem cell | 4.66e-12 | 6 |
surface ectodermal cell | 4.66e-12 | 6 |
keratinocyte | 1.61e-09 | 5 |
gingival epithelial cell | 6.81e-09 | 3 |
ecto-epithelial cell | 9.39e-09 | 34 |
bronchial epithelial cell | 1.24e-08 | 3 |
duct epithelial cell | 1.83e-08 | 3 |
branched duct epithelial cell | 1.83e-08 | 3 |
tracheal epithelial cell | 1.83e-08 | 3 |
tracheoblast | 1.83e-08 | 3 |
squamous epithelial cell | 3.06e-08 | 63 |
epidermal cell | 8.06e-08 | 9 |
epithelial cell of alimentary canal | 3.04e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.81e-09 | 3 |
lower respiratory tract epithelium | 1.24e-08 | 3 |
epithelium of bronchus | 1.24e-08 | 3 |
tracheobronchial tree | 1.73e-07 | 15 |
lower respiratory tract | 1.73e-07 | 15 |
cortex | 4.57e-07 | 15 |
pineal body | 4.89e-07 | 2 |
regional part of epithalamus | 4.89e-07 | 2 |
secretory circumventricular organ | 4.89e-07 | 2 |
circumventricular organ | 4.89e-07 | 2 |
epithalamus | 4.89e-07 | 2 |