FFCP PHASE1:Hg19::chr18:45457423..45457468,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:45457423..45457468,-
|short_description=p5@SMAD2
|description=CAGE_peak_5_at_SMAD2_5end
|association_with_transcript=43bp_to_ENST00000402690,NM_001003652_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4087 | |EntrezGene=4087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6768 | |HGNC=6768 | ||
|TSSclassifier=strong | |||
|UniProt=Q15796,Q53XR6 | |UniProt=Q15796,Q53XR6 | ||
|association_with_transcript=43bp_to_ENST00000402690,NM_001003652_5end | |||
|cluster_id=chr18:45457423..45457468,- | |||
|description=CAGE_peak_5_at_SMAD2_5end | |||
|id=chr18:45457423..45457468,- | |||
|ontology_enrichment_celltype=CL:0000860!1.13e-14!45;CL:0002057!5.51e-13!42;CL:0002009!8.44e-10!65;CL:0002194!1.68e-09!63;CL:0000576!1.68e-09!63;CL:0000040!1.68e-09!63;CL:0000559!1.68e-09!63;CL:0000766!3.90e-09!76;CL:0000557!4.05e-08!71;CL:0000763!6.17e-08!112;CL:0000049!6.17e-08!112;CL:0000839!1.47e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-11;33!CL:0002057;1.46e-11;33!CL:0000576;2.34e-09;48!CL:0000473;9.25e-08;39!CL:0000234;9.25e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.24e-13,42;CL:0002057,5.24e-13,42;CL:0000473,6.85e-11,48;CL:0000234,6.85e-11,48;CL:0002009,4.75e-09,61;CL:0002194,9.41e-09,59;CL:0000576,9.41e-09,59;CL:0000040,9.41e-09,59;CL:0000559,9.41e-09,59;CL:0000766,1.99e-08,72;CL:0000557,1.98e-07,67;CL:0000763,2.35e-07,108;CL:0000049,2.35e-07,108;CL:0000839,6.99e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.40e-07!101;UBERON:0001434!1.40e-07!101;UBERON:0002390!3.11e-07!102;UBERON:0003061!3.11e-07!102;UBERON:0002371!3.49e-07!80;UBERON:0001737!6.32e-07!9;UBERON:0001474!7.49e-07!86;UBERON:0000922!9.43e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.00e-07;9!UBERON:0001557;4.00e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,4.76e-07,100;UBERON:0001737,6.17e-07,9 | |||
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| ||
|short_description=p5@SMAD2 | |||
}} | }} |
Latest revision as of 16:07, 19 September 2015
Short description: | p5@SMAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SMAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000402690, NM_001003652_5end |
EntrezGene: | SMAD2 |
HGNC: | 6768 |
UniProt: | Q15796Q53XR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.24e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.24e-13 | 42 |
defensive cell | 6.85e-11 | 48 |
phagocyte | 6.85e-11 | 48 |
macrophage dendritic cell progenitor | 4.75e-09 | 61 |
monopoietic cell | 9.41e-09 | 59 |
monocyte | 9.41e-09 | 59 |
monoblast | 9.41e-09 | 59 |
promonocyte | 9.41e-09 | 59 |
myeloid leukocyte | 1.99e-08 | 72 |
granulocyte monocyte progenitor cell | 1.98e-07 | 67 |
myeloid cell | 2.35e-07 | 108 |
common myeloid progenitor | 2.35e-07 | 108 |
myeloid lineage restricted progenitor cell | 6.99e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 4.76e-07 | 100 |
larynx | 6.17e-07 | 9 |