FFCP PHASE1:Hg19::chr17:26695013..26695024,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645832 | |EntrezGene=645832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32942 | |HGNC=32942 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDG5 | |UniProt=C9JDG5 | ||
|association_with_transcript=-26bp_to_ENST00000438614_5end | |association_with_transcript=-26bp_to_ENST00000438614_5end | ||
|cluster_id=chr17:26695013..26695024,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_7_at_SEBOX_5end | |description=CAGE_peak_7_at_SEBOX_5end | ||
|id=chr17:26695013..26695024,- | |id=chr17:26695013..26695024,- | ||
|ontology_enrichment_celltype=CL:0000181!9.30e-30!12;CL:0000417!9.30e-30!12;CL:0000668!9.30e-30!12;CL:0000414!9.30e-30!12;CL:0000412!9.30e-30!12;CL:0000182!9.30e-30!12;CL:0002563!4.68e-11!4;CL:0000223!5.70e-10!59 | |ontology_enrichment_celltype=CL:0000181!9.30e-30!12;CL:0000417!9.30e-30!12;CL:0000668!9.30e-30!12;CL:0000414!9.30e-30!12;CL:0000412!9.30e-30!12;CL:0000182!9.30e-30!12;CL:0002563!4.68e-11!4;CL:0000223!5.70e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.10e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.55e-11;11!UBERON:0009497;9.94e-10;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.62e-33!19;UBERON:0006925!4.62e-33!19;UBERON:0008836!4.62e-33!19;UBERON:0009497!1.99e-31!25;UBERON:0000015!1.99e-31!25;UBERON:0002423!1.99e-31!25;UBERON:0006235!1.99e-31!25;UBERON:0004161!1.99e-31!25;UBERON:0008835!1.93e-28!22;UBERON:0003894!1.93e-28!22;UBERON:0009854!3.62e-27!23;UBERON:0007499!6.32e-25!25;UBERON:0005057!6.20e-24!26;UBERON:0009856!6.20e-24!26;UBERON:0003929!6.12e-21!54;UBERON:0005172!1.91e-20!55;UBERON:0005173!1.91e-20!55;UBERON:0002365!6.23e-20!31;UBERON:0002330!6.23e-20!31;UBERON:0002417!2.81e-18!61;UBERON:0000916!2.81e-18!61;UBERON:0002368!1.50e-17!35;UBERON:0000949!1.92e-13!45;UBERON:0005911!3.08e-13!82;UBERON:0001242!4.68e-11!4;UBERON:0001262!4.68e-11!4;UBERON:0004786!4.68e-11!4;UBERON:0004808!4.68e-11!4;UBERON:0001277!4.68e-11!4;UBERON:0002530!5.02e-10!59;UBERON:0005177!1.03e-09!107;UBERON:0009569!4.12e-09!113;UBERON:0003350!5.07e-09!5;UBERON:0000490!3.45e-07!138 | |ontology_enrichment_uberon=UBERON:0002107!4.62e-33!19;UBERON:0006925!4.62e-33!19;UBERON:0008836!4.62e-33!19;UBERON:0009497!1.99e-31!25;UBERON:0000015!1.99e-31!25;UBERON:0002423!1.99e-31!25;UBERON:0006235!1.99e-31!25;UBERON:0004161!1.99e-31!25;UBERON:0008835!1.93e-28!22;UBERON:0003894!1.93e-28!22;UBERON:0009854!3.62e-27!23;UBERON:0007499!6.32e-25!25;UBERON:0005057!6.20e-24!26;UBERON:0009856!6.20e-24!26;UBERON:0003929!6.12e-21!54;UBERON:0005172!1.91e-20!55;UBERON:0005173!1.91e-20!55;UBERON:0002365!6.23e-20!31;UBERON:0002330!6.23e-20!31;UBERON:0002417!2.81e-18!61;UBERON:0000916!2.81e-18!61;UBERON:0002368!1.50e-17!35;UBERON:0000949!1.92e-13!45;UBERON:0005911!3.08e-13!82;UBERON:0001242!4.68e-11!4;UBERON:0001262!4.68e-11!4;UBERON:0004786!4.68e-11!4;UBERON:0004808!4.68e-11!4;UBERON:0001277!4.68e-11!4;UBERON:0002530!5.02e-10!59;UBERON:0005177!1.03e-09!107;UBERON:0009569!4.12e-09!113;UBERON:0003350!5.07e-09!5;UBERON:0000490!3.45e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.65e-37;19!UBERON:0006925;1.65e-37;19!UBERON:0002423;1.20e-28;25!UBERON:0002365;3.93e-23;31!UBERON:0002330;3.93e-23;31!UBERON:0002368;5.42e-20;33!UBERON:0000949;1.72e-14;43!UBERON:0005172;1.89e-10;52!UBERON:0005173;1.89e-10;52!UBERON:0002417;4.38e-08;58!UBERON:0000916;4.38e-08;58!UBERON:0002530;1.25e-07;57!UBERON:0001007;1.67e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-37,19;UBERON:0006925,1.65e-37,19;UBERON:0008836,1.65e-37,19;UBERON:0008835,1.78e-32,22;UBERON:0003894,1.78e-32,22;UBERON:0009854,4.34e-31,23;UBERON:0007499,1.20e-28,25;UBERON:0009497,1.20e-28,25;UBERON:0000015,1.20e-28,25;UBERON:0002423,1.20e-28,25;UBERON:0006235,1.20e-28,25;UBERON:0004161,1.20e-28,25;UBERON:0009856,1.45e-27,26;UBERON:0002365,3.34e-23,31;UBERON:0002330,3.34e-23,31;UBERON:0002368,1.32e-20,35;UBERON:0000949,3.99e-16,45;UBERON:0003929,1.67e-13,54;UBERON:0005172,1.67e-13,54;UBERON:0005173,1.67e-13,54;UBERON:0002530,2.17e-12,59;UBERON:0002417,3.45e-12,60;UBERON:0000916,3.45e-12,60;UBERON:0005911,5.32e-09,82;UBERON:0001041,1.69e-08,87;UBERON:0005177,2.36e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,7.86261773342101,3.54473944008842,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,10.6983130585,2.65013777824443,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,7.86261773342101,3.54473944008842,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,10.6983130585,2.65013777824443,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@SEBOX | |short_description=p7@SEBOX | ||
}} | }} |
Latest revision as of 05:27, 19 September 2015
Short description: | p7@SEBOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SEBOX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -26bp_to_ENST00000438614_5end |
EntrezGene: | SEBOX |
HGNC: | 32942 |
UniProt: | C9JDG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.10e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.65e-37 | 19 |
digestive gland | 1.65e-37 | 19 |
liver bud | 1.65e-37 | 19 |
hepatic diverticulum | 1.78e-32 | 22 |
liver primordium | 1.78e-32 | 22 |
digestive tract diverticulum | 4.34e-31 | 23 |
epithelial sac | 1.20e-28 | 25 |
epithelium of foregut-midgut junction | 1.20e-28 | 25 |
anatomical boundary | 1.20e-28 | 25 |
hepatobiliary system | 1.20e-28 | 25 |
foregut-midgut junction | 1.20e-28 | 25 |
septum transversum | 1.20e-28 | 25 |
sac | 1.45e-27 | 26 |
exocrine gland | 3.34e-23 | 31 |
exocrine system | 3.34e-23 | 31 |
endocrine gland | 1.32e-20 | 35 |
endocrine system | 3.99e-16 | 45 |
gut epithelium | 1.67e-13 | 54 |
abdomen element | 1.67e-13 | 54 |
abdominal segment element | 1.67e-13 | 54 |
gland | 2.17e-12 | 59 |
abdominal segment of trunk | 3.45e-12 | 60 |
abdomen | 3.45e-12 | 60 |
endo-epithelium | 5.32e-09 | 82 |
foregut | 1.69e-08 | 87 |
trunk region element | 2.36e-07 | 101 |