FFCP PHASE1:Hg19::chr17:48272916..48272940,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48272916..48272940,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_at_chr17:48272916..48272940,+ | |description=CAGE_peak_at_chr17:48272916..48272940,+ | ||
|id=chr17:48272916..48272940,+ | |id=chr17:48272916..48272940,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.30e-22!180;CL:0000057!2.56e-14!75;CL:0000183!8.06e-10!59;CL:0000048!8.48e-10!430;CL:0000723!3.20e-09!436;CL:0000187!6.71e-09!54;CL:0000680!9.65e-09!57;CL:0000056!9.65e-09!57;CL:0000355!9.65e-09!57;CL:0000144!9.82e-09!625;CL:0000034!1.73e-08!444;CL:0002371!3.60e-08!591;CL:0000393!3.22e-07!60;CL:0000211!3.22e-07!60 | |ontology_enrichment_celltype=CL:0000055!9.30e-22!180;CL:0000057!2.56e-14!75;CL:0000183!8.06e-10!59;CL:0000048!8.48e-10!430;CL:0000723!3.20e-09!436;CL:0000187!6.71e-09!54;CL:0000680!9.65e-09!57;CL:0000056!9.65e-09!57;CL:0000355!9.65e-09!57;CL:0000144!9.82e-09!625;CL:0000034!1.73e-08!444;CL:0002371!3.60e-08!591;CL:0000393!3.22e-07!60;CL:0000211!3.22e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.11e-10;3!CL:0000388;1.11e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.17e-14,76;CL:0000135,1.39e-10,3;CL:0000388,1.39e-10,3;CL:0002320,9.31e-10,361;CL:0000134,7.88e-09,354;CL:0000048,8.12e-09,427;CL:0000723,1.58e-08,433;CL:0000034,3.75e-08,441;CL:0000219,1.14e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.94e-10!83;UBERON:0002329!2.94e-10!83;UBERON:0003077!2.94e-10!83;UBERON:0003059!2.94e-10!83;UBERON:0007282!2.94e-10!83;UBERON:0009618!2.94e-10!83;UBERON:0007285!2.94e-10!83;UBERON:0002385!3.73e-10!63;UBERON:0001015!3.73e-10!63;UBERON:0000383!3.73e-10!63;UBERON:0001134!4.27e-10!61;UBERON:0002036!4.27e-10!61;UBERON:0003082!4.27e-10!61;UBERON:0004290!4.23e-09!70;UBERON:0000486!9.51e-08!82;UBERON:0005256!5.95e-07!143 | |ontology_enrichment_uberon=UBERON:0000914!2.94e-10!83;UBERON:0002329!2.94e-10!83;UBERON:0003077!2.94e-10!83;UBERON:0003059!2.94e-10!83;UBERON:0007282!2.94e-10!83;UBERON:0009618!2.94e-10!83;UBERON:0007285!2.94e-10!83;UBERON:0002385!3.73e-10!63;UBERON:0001015!3.73e-10!63;UBERON:0000383!3.73e-10!63;UBERON:0001134!4.27e-10!61;UBERON:0002036!4.27e-10!61;UBERON:0003082!4.27e-10!61;UBERON:0004290!4.23e-09!70;UBERON:0000486!9.51e-08!82;UBERON:0005256!5.95e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.11e-10;3!UBERON:0000043;1.11e-10;3!UBERON:0007845;1.11e-10;3!UBERON:0004457;2.10e-08;9!UBERON:0000042;2.10e-08;9!UBERON:0003688;2.33e-08;6!UBERON:0002358;2.33e-08;6!UBERON:0003684;2.33e-08;6!UBERON:0001178;2.33e-08;6!UBERON:0003104;1.16e-07;7!UBERON:0009142;1.16e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.39e-10,3;UBERON:0000043,1.39e-10,3;UBERON:0007845,1.39e-10,3;UBERON:0002384,6.65e-10,371;UBERON:0003688,3.47e-08,6;UBERON:0002358,3.47e-08,6;UBERON:0003684,3.47e-08,6;UBERON:0001178,3.47e-08,6 | |||
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| ||
|short_description=p@chr17:48272916..48272940,+ | |short_description=p@chr17:48272916..48272940,+ | ||
}} | }} |
Latest revision as of 18:37, 25 July 2015
Short description: | p@chr17:48272916..48272940, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48272916..48272940, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.17e-14 | 76 |
fibrocyte | 1.39e-10 | 3 |
tendon cell | 1.39e-10 | 3 |
connective tissue cell | 9.31e-10 | 361 |
mesenchymal cell | 7.88e-09 | 354 |
multi fate stem cell | 8.12e-09 | 427 |
somatic stem cell | 1.58e-08 | 433 |
stem cell | 3.75e-08 | 441 |
motile cell | 1.14e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.39e-10 | 3 |
tendon | 1.39e-10 | 3 |
regular connective tissue | 1.39e-10 | 3 |
connective tissue | 6.65e-10 | 371 |
omentum | 3.47e-08 | 6 |
peritoneum | 3.47e-08 | 6 |
abdominal cavity | 3.47e-08 | 6 |
visceral peritoneum | 3.47e-08 | 6 |