FFCP PHASE1:Hg19::chr17:73089589..73089617,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9121 | |EntrezGene=9121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10926 | |HGNC=10926 | ||
|TSSclassifier=strong | |||
|UniProt=O15375 | |UniProt=O15375 | ||
|association_with_transcript=-65bp_to_U59299_5end | |association_with_transcript=-65bp_to_U59299_5end | ||
|cluster_id=chr17:73089589..73089617,+ | |||
|coexpression_cluster_id=C133 | |coexpression_cluster_id=C133 | ||
|description=CAGE_peak_5_at_SLC16A5_5end | |description=CAGE_peak_5_at_SLC16A5_5end | ||
|id=chr17:73089589..73089617,+ | |id=chr17:73089589..73089617,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.35e-08!3;CL:0000861!1.35e-08!3;CL:0000066!5.94e-07!254 | |ontology_enrichment_celltype=CL:0002150!1.35e-08!3;CL:0000861!1.35e-08!3;CL:0000066!5.94e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.43e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.56e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.98e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.69e-16!106;DOID:299!9.34e-11!25;DOID:0050687!2.39e-10!143;DOID:4929!1.70e-07!2;DOID:3493!3.70e-07!2 | |ontology_enrichment_disease=DOID:305!1.69e-16!106;DOID:299!9.34e-11!25;DOID:0050687!2.39e-10!143;DOID:4929!1.70e-07!2;DOID:3493!3.70e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4929;8.58e-17;2!DOID:299;3.91e-15;25!DOID:2152;1.43e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.14e-16,2;DOID:299,4.37e-15,25;DOID:305,1.66e-10,106;DOID:2152,1.56e-09,1;DOID:0050687,3.39e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002294!3.21e-11!7;UBERON:0001173!3.21e-11!7;UBERON:0004912!3.21e-11!7;UBERON:0000077!4.34e-11!130;UBERON:0004921!6.53e-11!129;UBERON:0004185!6.53e-11!129;UBERON:0004119!5.05e-10!169;UBERON:0000925!5.05e-10!169;UBERON:0006595!5.05e-10!169;UBERON:0001007!9.54e-10!155;UBERON:0001555!9.54e-10!155;UBERON:0007026!9.54e-10!155;UBERON:0001041!3.16e-09!98;UBERON:0002394!1.58e-07!4;UBERON:0003928!1.58e-07!4;UBERON:0000341!2.33e-07!2;UBERON:0003127!2.63e-07!2 | |ontology_enrichment_uberon=UBERON:0002294!3.21e-11!7;UBERON:0001173!3.21e-11!7;UBERON:0004912!3.21e-11!7;UBERON:0000077!4.34e-11!130;UBERON:0004921!6.53e-11!129;UBERON:0004185!6.53e-11!129;UBERON:0004119!5.05e-10!169;UBERON:0000925!5.05e-10!169;UBERON:0006595!5.05e-10!169;UBERON:0001007!9.54e-10!155;UBERON:0001555!9.54e-10!155;UBERON:0007026!9.54e-10!155;UBERON:0001041!3.16e-09!98;UBERON:0002394!1.58e-07!4;UBERON:0003928!1.58e-07!4;UBERON:0000341!2.33e-07!2;UBERON:0003127!2.63e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.18e-18;7!UBERON:0001173;1.18e-18;7!UBERON:0002110;1.04e-11;3!UBERON:0000996;1.43e-09;1!UBERON:0004911;1.43e-09;1!UBERON:0000997;3.98e-09;1!UBERON:0004913;3.98e-09;1!UBERON:0005056;3.98e-09;1!UBERON:0003703;3.98e-09;1!UBERON:0004176;3.98e-09;1!UBERON:0001174;3.98e-09;1!UBERON:0004914;3.98e-09;1!UBERON:0002394;4.98e-09;4!UBERON:0003928;4.98e-09;4!UBERON:0002075;2.25e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.77e-14,9;UBERON:0001173,1.77e-14,9;UBERON:0004912,1.77e-14,9;UBERON:0002110,1.10e-11,3;UBERON:0006242,1.10e-11,3;UBERON:0000996,1.43e-09,1;UBERON:0004911,1.56e-09,1;UBERON:0000997,3.83e-09,1;UBERON:0005056,3.83e-09,1;UBERON:0004913,5.72e-09,1;UBERON:0003703,5.72e-09,1;UBERON:0001174,5.72e-09,1;UBERON:0004914,5.72e-09,1;UBERON:0002075,2.17e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,2.15012491469462,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0.0898683511473268,15.2167998474268,0,3.94573622547734,0,0,0,0,0,0,0,0,1.2517279311405,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10142335502381,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.126373159256976,0,0,0,0,0,0,22.1995445903238,0,0.173559738335131,1.37189356380129,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0.677942222341597,0,0,0,4.69323318563527,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.78741985211799,0,0,0,0,0,0,0,0.77380195455795,0,0,1.97014268247995,1.31136470337495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22412889249628,0,3.73755943986931,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0.227662191351298,0,0,0,0,0,0,0,2.51177897121645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,3.13195209033819,0.098150233615243,34.9904444699113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,1.42843150884526,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,1.42838658878244,0,0,0,0,0,0.217716747896961,0,0.336760265072938,4.37505452895326,0.332660356546013,0,0,0,2.42528045687785,0,0,0,3.32878387092756,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,2.15012491469462,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0.0898683511473268,15.2167998474268,0,3.94573622547734,0,0,0,0,0,0,0,0,1.2517279311405,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10142335502381,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.126373159256976,0,0,0,0,0,0,22.1995445903238,0,0.173559738335131,1.37189356380129,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0.677942222341597,0,0,0,4.69323318563527,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.78741985211799,0,0,0,0,0,0,0,0.77380195455795,0,0,1.97014268247995,1.31136470337495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22412889249628,0,3.73755943986931,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0.227662191351298,0,0,0,0,0,0,0,2.51177897121645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,3.13195209033819,0.098150233615243,34.9904444699113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,1.42843150884526,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,1.42838658878244,0,0,0,0,0,0.217716747896961,0,0.336760265072938,4.37505452895326,0.332660356546013,0,0,0,2.42528045687785,0,0,0,3.32878387092756,0,0 | ||
|short_description=p5@SLC16A5 | |short_description=p5@SLC16A5 | ||
}} | }} |
Latest revision as of 10:00, 17 September 2015
Short description: | p5@SLC16A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC16A5_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | -65bp_to_U59299_5end |
EntrezGene: | SLC16A5 |
HGNC: | 10926 |
UniProt: | O15375 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.56e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.77e-14 | 9 |
biliary tree | 1.77e-14 | 9 |
biliary bud | 1.77e-14 | 9 |
gallbladder | 1.10e-11 | 3 |
gall bladder primordium | 1.10e-11 | 3 |
vagina | 1.43e-09 | 1 |
epithelium of female gonad | 1.56e-09 | 1 |
mammalian vulva | 3.83e-09 | 1 |
external female genitalia | 3.83e-09 | 1 |
hepatopancreatic ampulla | 5.72e-09 | 1 |
extrahepatic bile duct | 5.72e-09 | 1 |
common bile duct | 5.72e-09 | 1 |
duodenal papilla | 5.72e-09 | 1 |
viscus | 2.17e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.14e-16 | 2 |
adenocarcinoma | 4.37e-15 | 25 |
carcinoma | 1.66e-10 | 106 |
ovary epithelial cancer | 1.56e-09 | 1 |
cell type cancer | 3.39e-07 | 143 |