FFCP PHASE1:Hg19::chr18:60987408..60987448,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:60987408..60987448,-
|short_description=p5@BCL2
|description=CAGE_peak_5_at_BCL2_5end
|association_with_transcript=-47bp_to_ENST00000398117_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=596 | |EntrezGene=596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=990 | |HGNC=990 | ||
|TSSclassifier=strong | |||
|UniProt=P10415 | |UniProt=P10415 | ||
|association_with_transcript=-47bp_to_ENST00000398117_5end | |||
|cluster_id=chr18:60987408..60987448,- | |||
|description=CAGE_peak_5_at_BCL2_5end | |||
|id=chr18:60987408..60987448,- | |||
|ontology_enrichment_celltype=CL:0000037!1.94e-20!172;CL:0000566!1.94e-20!172;CL:0002032!9.69e-20!165;CL:0000837!9.69e-20!165;CL:0002087!1.32e-19!119;CL:0000988!2.38e-19!182;CL:0002031!1.02e-18!124;CL:0000738!2.74e-18!140;CL:0000542!3.76e-17!53;CL:0000051!3.76e-17!53;CL:0000838!1.77e-16!52;CL:0000945!1.32e-10!24;CL:0000826!1.32e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.16e-14;24!CL:0000542;2.11e-09;53!CL:0002087;5.69e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.45e-18,53;CL:0000051,7.45e-18,53;CL:0000988,1.79e-17,177;CL:0002031,3.33e-17,120;CL:0000037,6.97e-17,168;CL:0002032,7.34e-17,161;CL:0000837,7.34e-17,161;CL:0000838,9.25e-17,52;CL:0002087,1.29e-16,115;CL:0000738,6.72e-16,136;CL:0000945,5.52e-15,24;CL:0000826,5.52e-15,24;CL:0000236,6.85e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.11e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!4.73e-07!51;DOID:0060083!4.73e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.05e-14!115;UBERON:0002390!1.32e-09!102;UBERON:0003061!1.32e-09!102;UBERON:0001049!2.02e-09!57;UBERON:0005068!2.02e-09!57;UBERON:0006241!2.02e-09!57;UBERON:0007135!2.02e-09!57;UBERON:0003080!1.06e-08!42;UBERON:0002780!2.98e-08!41;UBERON:0001890!2.98e-08!41;UBERON:0006240!2.98e-08!41;UBERON:0001893!3.34e-08!34;UBERON:0002020!3.65e-08!34;UBERON:0003528!3.65e-08!34;UBERON:0002791!7.16e-08!33;UBERON:0002193!1.45e-07!112;UBERON:0001869!1.72e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;3.27e-07;5!UBERON:0005057;3.27e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.52e-09,7;UBERON:0005057,2.52e-09,7;UBERON:0002390,1.86e-08,98;UBERON:0003061,1.86e-08,98;UBERON:0002193,2.34e-07,108;UBERON:0002405,3.22e-07,93 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.502170558379211,9.398848906998,8.45636071334441,5.43104391064387,1.18009283054671,0,0.154816123316076,0,0,0.369754010166788,0,3.55423081218554,1.17440175733939,1.10799081706375,0.601633342410425,0,0,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0,0.697287110717054,0.411167888021826,1.54853185447552,0.863077176966451,0.768482119587302,0.47296445977717,2.06847408441971,1.93645405075148,0,0.188242339542605,0.272906150057846,1.12361742222542,1.53041946185451,2.56743221660875,3.83602275479425,0.329851300186716,0.398927315243264,0,1.7412554317715,3.40431134814684,2.4912889959823,0.75374599577023,0.521482918420201,0.868755378820466,1.81619850790011,3.31449872388808,2.21523671208619,0.422510572623884,0,0.209658645508376,0,0.150176892841506,0,0,0,0,1.75996244461323,0.546138611262131,1.77901850772711,2.56038133539904,0.800791974072025,1.14950487990897,0,4.77026877267682,1.70763890732835,2.93618594685469,3.44045905312706,2.64342657158052,0,0.526768169550154,2.360517241366,2.75107533924415,0.822405995998037,4.68122187093899,0.977766799900771,1.89379122293893,1.94826728407911,1.44833593950726,0.883817722424512,0.443067789167242,0.270803863765016,3.0741916734162,2.60118695119756,4.93313713811028,4.69795030235942,1.15921234294021,3.11401782640327,2.1403266247177,1.04535523804977,2.49280553934646,1.14966148080576,1.03088233644789,0.506039384039006,1.59282707162048,0.651083453856419,0.950452044448374,0.752875595388864,0.76791966692651,0,0.947109008176067,0,1.61285394579786,1.87208137048455,1.30341963494519,0,0,0.12786256184353,0,0,0.289693037921647,0,1.45990461090791,0.472674085820339,0,0,0.654895377488563,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0,0,0.23486899728753,0.485618833104395,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0.609868530647977,0.132529768321485,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.695582429850461,0.117408694235822,0,0,0,0.790204397959275,0,0.246217006087397,0.702012795417713,0.743155811443641,0,0,0,0.268675568108545,0.290633938513962,0,0,0.088048434013226,1.86595303986695,2.73827911492227,2.27236380167484,0.63497894292169,1.14596527667483,0,1.71072446022705,0.719792448923265,0.901029173531752,0.857479297891735,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,2.4658731678576,1.37921532141349,2.15627574859517,1.02674429023799,0.76228387266739,0,1.54657762555539,2.01019518401218,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.82707210449155,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0,0.120859449591622,0,0.276242966807689,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,1.13345112812495,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.170453254832202,0.178064071293475,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.50630081242847,0,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0.569647187174163,0.952927101831156,0.411362273086194,0.648473311192717,0,0,0.427296284509893,1.92495971052672,0,11.891403208046,0.721346064882224,0.640276590135727,0.478278818186467,0.798317485731266,0.383010740264733,2.96343015813436,0.324621940274555,1.40398589056729,3.19528550646469,0.783399478865116,0,0.50787533340481,4.65705417800729,4.84319297258514,3.40676990152261,0.343505344755765,7.06653757909453,4.47352215784832,3.50383197595008,0.390776190804081,0,0,0.540911356951966,0.66614393599564,0,0.37428108081644,1.31857361344705,0.121360521749513,0.557216921387392,0,0.71623345421307,0.296964680832639,0.307160702099232,0.994147647766298,1.54736358051564,0.556543525114529,0.16480387422676,2.32237948940793,0.996239941255349,1.65770349318689,0,0.20453736500431,5.16956182936492,0,0.0898683511473268,0,4.60415133204185,0.394573622547734,0,0,0,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| ||
|short_description=p5@BCL2 | |||
}} | }} |
Latest revision as of 03:35, 20 September 2015
Short description: | p5@BCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BCL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000398117_5end |
EntrezGene: | BCL2 |
HGNC: | 990 |
UniProt: | P10415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.45e-18 | 53 |
common lymphoid progenitor | 7.45e-18 | 53 |
hematopoietic cell | 1.79e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 3.33e-17 | 120 |
hematopoietic stem cell | 6.97e-17 | 168 |
hematopoietic oligopotent progenitor cell | 7.34e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.34e-17 | 161 |
lymphoid lineage restricted progenitor cell | 9.25e-17 | 52 |
nongranular leukocyte | 1.29e-16 | 115 |
leukocyte | 6.72e-16 | 136 |
lymphocyte of B lineage | 5.52e-15 | 24 |
pro-B cell | 5.52e-15 | 24 |
B cell | 6.85e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.52e-09 | 7 |
immune organ | 2.52e-09 | 7 |
hematopoietic system | 1.86e-08 | 98 |
blood island | 1.86e-08 | 98 |
hemolymphoid system | 2.34e-07 | 108 |
immune system | 3.22e-07 | 93 |