FFCP PHASE1:Hg19::chr18:6774000..6774019,+: Difference between revisions
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|id=chr18:6774000..6774019,+
|short_description=p4@ARHGAP28
|description=CAGE_peak_4_at_ARHGAP28_5end
|association_with_transcript=0bp_to_ENST00000532723_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79822 | |EntrezGene=79822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25509 | |HGNC=25509 | ||
|TSSclassifier=strong | |||
|UniProt=E9PL26 | |UniProt=E9PL26 | ||
|association_with_transcript=0bp_to_ENST00000532723_5end | |||
|cluster_id=chr18:6774000..6774019,+ | |||
|description=CAGE_peak_4_at_ARHGAP28_5end | |||
|id=chr18:6774000..6774019,+ | |||
|ontology_enrichment_celltype=CL:0000071!5.44e-13!18;CL:0002546!5.44e-13!18;CL:0002543!5.15e-12!6;CL:0002139!1.51e-10!24;CL:0000115!1.04e-08!35;CL:0002078!5.19e-07!44;CL:0002618!6.18e-07!3;CL:1000413!6.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002543;7.63e-22;6!CL:0000071;4.81e-17;18!CL:0002618;1.52e-16;3!CL:0002139;1.76e-12;24!CL:0000115;2.22e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,8.15e-22,6;CL:0000071,5.87e-17,18;CL:0002546,5.87e-17,18;CL:0002618,1.87e-16,3;CL:0000115,1.88e-12,36;CL:0002139,2.03e-12,24;CL:0002078,1.34e-09,45;CL:0000213,4.68e-07,58;CL:0000215,4.68e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;4.81e-17;18!UBERON:0003124;6.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-19!115;UBERON:0001986!5.44e-13!18;UBERON:0004638!5.44e-13!18;UBERON:0004852!5.44e-13!18;UBERON:0000487!4.90e-10!22;UBERON:0006914!7.72e-10!25;UBERON:0001638!1.19e-07!9;UBERON:0003920!1.19e-07!9;UBERON:0004582!1.19e-07!9;UBERON:0003135!5.37e-07!11;UBERON:0003915!6.21e-07!9;UBERON:0004700!6.21e-07!9;UBERON:0001917!6.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.81e-17;18!UBERON:0001986;4.81e-17;18!UBERON:0004852;4.81e-17;18!UBERON:0000922;6.92e-16;49!UBERON:0001638;1.70e-14;9!UBERON:0003920;1.70e-14;9!UBERON:0004582;1.70e-14;9!UBERON:0000487;1.00e-13;22!UBERON:0006914;6.21e-12;25!UBERON:0002066;3.99e-10;5!UBERON:0000160;8.44e-10;17!UBERON:0002108;9.87e-10;4!UBERON:0005409;1.53e-07;22!UBERON:0000490;1.63e-07;33!UBERON:0007029;7.56e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.87e-17,18;UBERON:0001986,5.87e-17,18;UBERON:0004852,5.87e-17,18;UBERON:0001638,1.78e-14,9;UBERON:0003920,1.78e-14,9;UBERON:0004582,1.78e-14,9;UBERON:0000487,1.18e-13,22;UBERON:0006914,7.13e-12,25;UBERON:0002066,4.52e-10,5;UBERON:0000160,7.18e-10,17;UBERON:0002108,9.15e-10,4;UBERON:0007500,7.16e-07,59;UBERON:0001981,7.16e-07,59;UBERON:0004537,7.16e-07,59;UBERON:0006965,7.16e-07,59;UBERON:0007029,8.21e-07,1 | |||
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| ||
|short_description=p4@ARHGAP28 | |||
}} | }} |
Latest revision as of 06:58, 20 September 2015
Short description: | p4@ARHGAP28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGAP28_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000532723_5end |
EntrezGene: | ARHGAP28 |
HGNC: | 25509 |
UniProt: | E9PL26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 8.15e-22 | 6 |
blood vessel endothelial cell | 5.87e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.87e-17 | 18 |
endothelial cell of umbilical vein | 1.87e-16 | 3 |
endothelial cell | 1.88e-12 | 36 |
endothelial cell of vascular tree | 2.03e-12 | 24 |
meso-epithelial cell | 1.34e-09 | 45 |
lining cell | 4.68e-07 | 58 |
barrier cell | 4.68e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.87e-17 | 18 |
endothelium | 5.87e-17 | 18 |
cardiovascular system endothelium | 5.87e-17 | 18 |
vein | 1.78e-14 | 9 |
venous blood vessel | 1.78e-14 | 9 |
venous system | 1.78e-14 | 9 |
simple squamous epithelium | 1.18e-13 | 22 |
squamous epithelium | 7.13e-12 | 25 |
umbilical vein | 4.52e-10 | 5 |
intestine | 7.18e-10 | 17 |
small intestine | 9.15e-10 | 4 |
epithelial tube open at both ends | 7.16e-07 | 59 |
blood vessel | 7.16e-07 | 59 |
blood vasculature | 7.16e-07 | 59 |
vascular cord | 7.16e-07 | 59 |
surface | 8.21e-07 | 1 |