FFCP PHASE1:Hg19::chr1:10682996..10683025,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:10682996..10683025,+ | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_at_chr1:10682996..10683025,+ | |description=CAGE_peak_at_chr1:10682996..10683025,+ | ||
|id=chr1:10682996..10683025,+ | |id=chr1:10682996..10683025,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.10e-23;1!UBERON:0005754;3.28e-23;1!UBERON:0009143;5.73e-23;1!UBERON:0007297;2.59e-12;2!UBERON:0006603;5.35e-10;65!UBERON:0009847;9.66e-09;3!UBERON:0003353;9.66e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.48e-28!3;UBERON:0004054!2.48e-28!3;UBERON:0005904!2.02e-21!4;UBERON:0007023!3.72e-20!115;UBERON:0003135!1.31e-13!11;UBERON:0004175!7.68e-13!25;UBERON:0001000!9.84e-11!1;UBERON:0005352!9.84e-11!1;UBERON:0000998!1.08e-10!1;UBERON:0006868!1.08e-10!1;UBERON:0000996!1.19e-10!1;UBERON:0001154!1.57e-10!1;UBERON:0001153!1.57e-10!1;UBERON:0001301!1.89e-10!1;UBERON:0006834!2.08e-10!1;UBERON:0003101!2.18e-10!22;UBERON:0000079!2.18e-10!22;UBERON:0001155!1.22e-09!9;UBERON:0005156!5.58e-09!59;UBERON:0000990!5.58e-09!59;UBERON:0003133!1.21e-08!48;UBERON:0001046!4.53e-08!19;UBERON:0000059!5.60e-08!11;UBERON:0001008!6.04e-07!45 | |ontology_enrichment_uberon=UBERON:0006947!2.48e-28!3;UBERON:0004054!2.48e-28!3;UBERON:0005904!2.02e-21!4;UBERON:0007023!3.72e-20!115;UBERON:0003135!1.31e-13!11;UBERON:0004175!7.68e-13!25;UBERON:0001000!9.84e-11!1;UBERON:0005352!9.84e-11!1;UBERON:0000998!1.08e-10!1;UBERON:0006868!1.08e-10!1;UBERON:0000996!1.19e-10!1;UBERON:0001154!1.57e-10!1;UBERON:0001153!1.57e-10!1;UBERON:0001301!1.89e-10!1;UBERON:0006834!2.08e-10!1;UBERON:0003101!2.18e-10!22;UBERON:0000079!2.18e-10!22;UBERON:0001155!1.22e-09!9;UBERON:0005156!5.58e-09!59;UBERON:0000990!5.58e-09!59;UBERON:0003133!1.21e-08!48;UBERON:0001046!4.53e-08!19;UBERON:0000059!5.60e-08!11;UBERON:0001008!6.04e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.59e-30;3!UBERON:0004054;3.59e-30;3!UBERON:0001000;2.62e-23;1!UBERON:0005352;2.62e-23;1!UBERON:0000998;3.28e-23;1!UBERON:0006868;3.28e-23;1!UBERON:0000996;4.10e-23;1!UBERON:0005904;6.42e-23;4!UBERON:0004175;4.56e-17;21!UBERON:0001255;1.65e-12;2!UBERON:0001556;1.65e-12;2!UBERON:0000058;8.84e-10;10!UBERON:0003101;1.06e-09;22!UBERON:0000079;1.06e-09;22!UBERON:0003135;5.64e-09;11!UBERON:0001043;1.46e-08;3!UBERON:0003937;2.46e-08;12!UBERON:0005399;2.46e-08;12!UBERON:0000077;4.88e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.59e-30,3;UBERON:0004054,3.59e-30,3;UBERON:0001000,2.62e-23,1;UBERON:0005352,2.62e-23,1;UBERON:0000998,3.28e-23,1;UBERON:0006868,3.28e-23,1;UBERON:0000996,4.10e-23,1;UBERON:0005904,6.42e-23,4;UBERON:0000162,6.68e-15,14;UBERON:0001353,6.68e-15,14;UBERON:0000163,6.68e-15,14;UBERON:0006866,6.68e-15,14;UBERON:0000164,6.68e-15,14;UBERON:0000931,6.68e-15,14;UBERON:0004175,2.10e-14,25;UBERON:0004122,5.89e-14,15;UBERON:0003064,4.96e-13,28;UBERON:0001255,1.65e-12,2;UBERON:0001556,1.65e-12,2;UBERON:0007023,3.63e-12,114;UBERON:0001046,3.67e-11,19;UBERON:0003101,1.06e-09,22;UBERON:0000079,1.06e-09,22;UBERON:0005156,1.76e-09,59;UBERON:0000990,1.76e-09,59;UBERON:0003135,5.64e-09,11;UBERON:0001043,1.40e-08,3;UBERON:0009143,1.40e-08,3;UBERON:0003937,2.46e-08,12;UBERON:0005399,2.46e-08,12;UBERON:0001008,9.38e-08,48;UBERON:0003133,1.10e-07,48;UBERON:0000077,1.59e-07,29 | |||
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|short_description=p@chr1:10682996..10683025,+ | |short_description=p@chr1:10682996..10683025,+ | ||
}} | }} |
Latest revision as of 19:08, 27 July 2015
Short description: | p@chr1:10682996..10683025, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:10682996..10683025, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.59e-30 | 3 |
internal male genitalia | 3.59e-30 | 3 |
vas deferens | 2.62e-23 | 1 |
spermatic cord | 2.62e-23 | 1 |
seminal vesicle | 3.28e-23 | 1 |
seminal fluid secreting gland | 3.28e-23 | 1 |
vagina | 4.10e-23 | 1 |
duct of male reproductive system | 6.42e-23 | 4 |
cloaca | 6.68e-15 | 14 |
anal region | 6.68e-15 | 14 |
embryonic cloaca | 6.68e-15 | 14 |
terminal part of digestive tract | 6.68e-15 | 14 |
primitive urogenital sinus | 6.68e-15 | 14 |
proctodeum | 6.68e-15 | 14 |
internal genitalia | 2.10e-14 | 25 |
genitourinary system | 5.89e-14 | 15 |
intermediate mesoderm | 4.96e-13 | 28 |
urinary bladder | 1.65e-12 | 2 |
lower urinary tract | 1.65e-12 | 2 |
adult organism | 3.63e-12 | 114 |
hindgut | 3.67e-11 | 19 |
male organism | 1.06e-09 | 22 |
male reproductive system | 1.06e-09 | 22 |
reproductive structure | 1.76e-09 | 59 |
reproductive system | 1.76e-09 | 59 |
male reproductive organ | 5.64e-09 | 11 |
esophagus | 1.40e-08 | 3 |
esophageal region | 1.40e-08 | 3 |
sex gland | 2.46e-08 | 12 |
male reproductive gland | 2.46e-08 | 12 |
renal system | 9.38e-08 | 48 |
reproductive organ | 1.10e-07 | 48 |
mixed endoderm/mesoderm-derived structure | 1.59e-07 | 29 |